Gene Sama_0356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0356 
Symbol 
ID4602612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp427031 
End bp427855 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content56% 
IMG OID639779685 
Productcell division protein FtsQ 
Protein accessionYP_926237 
Protein GI119773497 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1589] Cell division septal protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0290766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000649691 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGCAAGAG ACAGGAAAAC CCCGACGCGC AGGGCGCCGC CGGAAAAGCG GCCCAGAGGG 
CCGGAGCTTC GCCAGCGCGG AGTGCAGTTT TGGGCAGGAT TATGTTCGCT TAATTGGTAT
CTCATCACCG GATTCAGCTT TTTTCTGCTG GTGCTGGCAG GTTTGGGGTA CAGCGGATAT
CGGCTCCATG GGCTGTTAAA TAACGCTGAA GCCTTGCCCA TTGAGGCCCT GGTTATCAAG
GGTGACCGGG TATACACCAC GGAAGAGGAA ATCCGTGGTG CCATGGAGAA GCTGATGGCA
CGAAGCTTTT TCAGCGCCGA TGTGATGGAA ATACAGCAGG CGATTGAAGC CCTGCCTTGG
GTATACAAGG CATCGGTACG CCGGATGTGG CCCGCGCGAA TCAAGGTGTA CCTGCAGGAG
CAGCAGGCAG CTGCCCGTTG GAACGGCATG GATTGGGTCA ATGAGCAGGG CGAGGTGTTC
AGCGCACCTG AGCAGCAGGG GCTGACCGAC CTGCCCAAAC TGTCAGGACC CGAGAATATG
TCGGCAGAGG TGCTCACCTC TTATAGGCAG ATAGCGGAAT TGCTGCAGAT TAATGGCTAT
GGGCTAGAAA GCCTGAGCCT GAGCCCAAGA CATGCGTGGA TTGCCGTGCT TGATAATGGC
ATCACACTGG AGCTTGGGAG GGAAGACAAG ATGGCGAGGG TGCAGCGTTT TATCAATGTG
TACCCGACGC TGGCTAAGCA GCCCAAGGCT GTCGCCCGGG TGGATTTGCG CTACGACACA
GGATTGGCCG TAGGCTGGAA TGAGACAAAA CAAGAGAGTC GCTAA
 
Protein sequence
MARDRKTPTR RAPPEKRPRG PELRQRGVQF WAGLCSLNWY LITGFSFFLL VLAGLGYSGY 
RLHGLLNNAE ALPIEALVIK GDRVYTTEEE IRGAMEKLMA RSFFSADVME IQQAIEALPW
VYKASVRRMW PARIKVYLQE QQAAARWNGM DWVNEQGEVF SAPEQQGLTD LPKLSGPENM
SAEVLTSYRQ IAELLQINGY GLESLSLSPR HAWIAVLDNG ITLELGREDK MARVQRFINV
YPTLAKQPKA VARVDLRYDT GLAVGWNETK QESR