Gene Sama_0353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0353 
Symbol 
ID4602609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp423163 
End bp424371 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content55% 
IMG OID639779682 
Productcell division protein FtsW 
Protein accessionYP_926234 
Protein GI119773494 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0772] Bacterial cell division membrane protein 
TIGRFAM ID[TIGR02614] cell division protein FtsW 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000708854 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACTG ACAGCAAACA GCTCACCCTG TTTGAGCGTA GCGGCCATTT CTGGACCAGC 
TGGCTAAGCG GACGCAGTGC GCCCGGCAAC CAGCTGTATG ACCGTGCGCT GCTGTCTGTT
GTGTTGGGAT TGATGGGATT TGGCTTTGTG ATGGTGATGT CGGCCTCCAT GCCCGAAGCC
CAGAGTTTGA AGGACGACCC CTTCCACTTT ATGTACCGCC ATGTGTTTTA TCTGGTGGGT
TGTGTGGCGA TTGCCACTGT GGTGCTGCGT ATCCCCATGG CGAGCTGGCA AAAATACAGC
CCCTTGTTAT TGCTGGGGGT CTTTGTGCTG CTTATCGCCG TGCTGGTGGT GGGCACTACC
GTGAATGGTG CCAGGCGTTG GCTCAGCGTG GGCCCGATAC GCATTCAGGT AGCCGAAATG
GCCAAACTGG TATTTGCCAT TTACCTGTCG GGCTACCTAG TGCGCAGGCT CCAGGAAGTG
CGTGAAAATG CCAAGGGGTT TTATAAGCCC ATCGCCGTGT TTGCGCTTTA TGCACTCTTG
ATCCTGGCCC AGCCGGATCT GGGCACTGTG GTGGTGCTTT TTGTGGGCAC AGTTGGCCTG
CTGTTCCTGG CCGGCGCCAG GCTGCTCGAC TTTTTTATGT TGATTTTTGC CGGCGTGATG
GCCTTCGTCG CTCTGGTTGT GCTCGAGCCT TACCGTGTTG CCCGGGTGAC ATCTTTCCTT
AATCCCTGGG AAGATCCCTT CGGCAGCGGT TACCAGCTCA CTCAGTCACT GATGGCCTAT
GGTCGGGGTG ACTGGCTGGG GCAGGGACTG GGCAACAGTA TTCAGAAACT GGAATATCTG
CCTGAGGCCC ATACCGACTT TATTTTTGCC GTAATCGGTG AAGAGCTGGG ATTTATCGGC
ATTGTAATGG TATTGCTGGC GTTGATGTTT GTGGCACTGC GCGCCATCCG GTTGGGTAAC
GAGTGTTTGG GGCTTGAGCG TGCCTTTGAA GGCTACCTCG CCTATGCCAT CGGTATTTGG
ATTTGTTTCC AAACCGTGGT GAATGTGGGG GCCAGTATCG GCATGTTGCC CACCAAGGGA
CTGACGCTGC CGTTTATCAG TTACGGCGGC TCCAGTTTGT GGGTAATGAC CTCGGCTGTG
TGTATTTTGC TTCGCATCGA TTATGAAAAA CGCCTGAGTC AGATTCAGGC CGTACAGGGG
AGACTCTAA
 
Protein sequence
MATDSKQLTL FERSGHFWTS WLSGRSAPGN QLYDRALLSV VLGLMGFGFV MVMSASMPEA 
QSLKDDPFHF MYRHVFYLVG CVAIATVVLR IPMASWQKYS PLLLLGVFVL LIAVLVVGTT
VNGARRWLSV GPIRIQVAEM AKLVFAIYLS GYLVRRLQEV RENAKGFYKP IAVFALYALL
ILAQPDLGTV VVLFVGTVGL LFLAGARLLD FFMLIFAGVM AFVALVVLEP YRVARVTSFL
NPWEDPFGSG YQLTQSLMAY GRGDWLGQGL GNSIQKLEYL PEAHTDFIFA VIGEELGFIG
IVMVLLALMF VALRAIRLGN ECLGLERAFE GYLAYAIGIW ICFQTVVNVG ASIGMLPTKG
LTLPFISYGG SSLWVMTSAV CILLRIDYEK RLSQIQAVQG RL