| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0349 |
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| Symbol | murE |
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| ID | 4602605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 417929 |
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| End bp | 419392 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639779678 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_926230 |
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| Protein GI | 119773490 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.593739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.1204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGTTGC TGAAAGACTT ATTGGCCCCC TGGTTTCATT ACGCAGGTAC TGAGTCGGTT
CACGCCCCTG TGATAGACAG TCGGCAGTTA ACCGCTGGCG GCCTGTTCAT TGCTGTGCCG
GGTTACAAAA CCGATGGAAG GGCCTATCTT GACGCTGCGT TTGCCAAGGG CGCGGCAGCG
GCACTGGTAC ACACAGATGA CCCGGATGAG CATGGTAAGG TCAGCTATGA GCCCGGACTT
TGTATCGCCT TTTTCCAACT GAATCGCCAG GTGTCGGCGG TGGCTCGGCA ATATTACGCC
CTGACGAGGG GCAAGCTCAG GGTGGTGGGG GTTACCGGCA CCAATGGCAA AACCTCGGTC
AGCCAACTGA TTGCCCAACT TACAGAACTT TTGGGCGACA AGGCCGCAGT AATGGGCACC
CTCGGCAATG GCCTTTGGGG GCAGTTACAG GATGTGGGCA ACACCACCGC CGATGCGGTG
CGTGTGATGG CCGATCTCTA TGACTTCGAG CATCAGGGCG CCAAGGTGTG CGCAATGGAA
GTCTCCAGCC ATGGTCTGGT GCAGGGCCGG GTAGAGGCTG TGCCGTTCGA GGTGGCCGTG
TTTACCAATC TCAGCCGTGA TCATCTGGAT TACCACGGCG ATATGGATAA CTACGCCGCA
GCCAAGCGTC GTCTCTTTGC GTTTGGCAGC TTAAGTGCCC GTGTTATCAA TCTCGACGAT
AAAGTCGGTG AGCAATGGTT TGACGGCATG GGCTGTGCCA CTGGATTCAG CTGTCTTGGA
CATGCCAAGG CAGATTGGCG TTTTGAGAAC GCTCATTTTC ACCATGCGGG CTTCAGTGCA
AACCTGGTAT GGCCGGGTGG GCAGAAGCCC CTGGAATGCC GATTACTGGG CGCTTTCAAT
CTTTCCAATC TGCTCGCAGC CCTGTGCGCC ATGGCGCAAC TGGGATATCA GGTGCCGGAC
TTGGTCGCGG CTGCGGCCAA ACTCGAAGCC GTCCCCGGAC GGATGGAGTG TTTCCCCCGT
AAAGATGGCG TCTCCCTTGT AGTGGATTAT GCCCACACGC CCGATGCCAT AGAGCAGGCG
CTCAAAGCGG CCCGTCATCA CTGTGAAGGG GCGCTTTGGA TTGTATTTGG CTGTGGCGGG
GACAGAGACA AGGGGAAGCG GCCGCTGATG GCCGAAGCGG CAGAAGCCTT CGCCGATTGC
CTGGTGCTGA CGTCGGATAA TGCCCGCAGC GAAGACCCGG CAGTCATTTT GGAAGATATG
AAAGCAGGTC TTGATGCCCC AGAACGTGCC CTGTGTATGG TCGACAGGGT TGCAGCCATA
CGTCACGCAG TGTCGATGGC CAAACCGGGG GATCTCATTT TGCTGGCCGG TAAGGGGCAT
GAGACCTATC AAGAGATAGC CGGTGTTAAA CATGAATATG ATGAGCGTGC CCTGGCACGG
GTGTTAAGCG AGGAAAATCT GTGA
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| Protein sequence | MMLLKDLLAP WFHYAGTESV HAPVIDSRQL TAGGLFIAVP GYKTDGRAYL DAAFAKGAAA
ALVHTDDPDE HGKVSYEPGL CIAFFQLNRQ VSAVARQYYA LTRGKLRVVG VTGTNGKTSV
SQLIAQLTEL LGDKAAVMGT LGNGLWGQLQ DVGNTTADAV RVMADLYDFE HQGAKVCAME
VSSHGLVQGR VEAVPFEVAV FTNLSRDHLD YHGDMDNYAA AKRRLFAFGS LSARVINLDD
KVGEQWFDGM GCATGFSCLG HAKADWRFEN AHFHHAGFSA NLVWPGGQKP LECRLLGAFN
LSNLLAALCA MAQLGYQVPD LVAAAAKLEA VPGRMECFPR KDGVSLVVDY AHTPDAIEQA
LKAARHHCEG ALWIVFGCGG DRDKGKRPLM AEAAEAFADC LVLTSDNARS EDPAVILEDM
KAGLDAPERA LCMVDRVAAI RHAVSMAKPG DLILLAGKGH ETYQEIAGVK HEYDERALAR
VLSEENL
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