| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0339 |
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| Symbol | |
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| ID | 4602595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 408539 |
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| End bp | 409897 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639779668 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_926220 |
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| Protein GI | 119773480 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000148311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.499418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAATGA AAAAGAGTGT ACTGACTTTT GCCGTATCAG CGGCTCTTAT GGGGATTACG
ACTCAGGTTA ACGCTGCTGG CTTCCAGCTG GCTGAATACT CTGCCACTGG TCTTGGCCGT
GCTTTTGCCG GTGAAGCGGC CATGGCCGAC AACGCCGCGG CTCAAGCGCG TAACCCAGCC
ATGCTGGCAT ACCTGAGCGG TCGTCAGGTA TCCGGCGGCG GTATCTACGT CGCTACCGAA
GTGGACGTGA CCGGCGATGT GCACATTGCG TCTCCAGTGC TTGGTCCGCA GGGTGTGACG
CTGAATGCCG ACGCCTATGA CGTTGCCGAC AGTGCACTTA TCCCAAACTT CTATTACTCA
AGCCAAATCA ATGACAACTG GACCTGGGGT CTGGCTGTTA ACTCCAACTA CGGCCTGGCC
ACCGAGCTGC CTGCCACTCA CGCGGCCTCC TTGTTTGGCC ATCACACCGA AATCACCACA
GTTGAGTTCA ACCCCAACAT CGCATATCGC CTGAACGATG CGGTGACTTT GGGTGCCGGT
GTGCGCATTG TTTACGGTGA CGGTAGCATT GGTGCAGCTA CACCTTACTG GGTGGGCGCC
ATCAAGGCCA ATCCAAACCT GCCAGCACAA ATTGCCGCCC GTCTGCCTGA GCCTGGCACT
GTGCTCAAAA CCATGGAAGG CGATGATGTA AGCTACGGCT GGCAAGTGGG CGGTAGCTGG
CAGCCTTCTG AAAACCACAG ATTCGGCTTG GCTTATCACA GCGGTGTAGA GCTGGAGCTG
TCCGGGAGCG CTGCTGGTCT TGTCTACACT GGTGGCCAGA ACCTGGATAT TGAAGGTTAT
CTGCCACTGG AGCTGCCAGC TTTTGCCGAG TTGTCTTCTT TCCATCAGCT GAGTGATGAT
GTGGCGCTGC ACGCCAGCGT TAACTGGACC CAGTGGAGTG TGTTCGACCG TCTGGTGGCT
TACTTCCCCG GTGAAACCAA GCCAGTGGGT GGCATCGAGT CCGATCTGGT GAAAGAAGAG
AACTTCAAGG ACAGCTGGCG CGTTGCCGTA GGTTCTACCT GGAACGTAAA CAAAGACTGG
ACCGTACGCA GCGGCTTTGC GGTTGACCGC ACTGCAGTGG ATGATGAGTT CCGTACCACC
ACCATCCCCG ACTCTGACCG CCTGTGGTTC AGTCTGGGTG CCGGTTACCG CGCCAGCGAA
AACCTGACCG TGGATATGGC CATCACCTAT ATTCGTGCCC ACGGTTTCGC GCCTATCGAT
GAGCATCAGG ATCTGGCCGG TCTGGCTCAG GTCAGCTTTA ACGGTGAAGC CGGTGGCAGC
GTGTGGCTGG CCGGTGTGCA GTTAAGCTAT AAGATGTAA
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| Protein sequence | MIMKKSVLTF AVSAALMGIT TQVNAAGFQL AEYSATGLGR AFAGEAAMAD NAAAQARNPA
MLAYLSGRQV SGGGIYVATE VDVTGDVHIA SPVLGPQGVT LNADAYDVAD SALIPNFYYS
SQINDNWTWG LAVNSNYGLA TELPATHAAS LFGHHTEITT VEFNPNIAYR LNDAVTLGAG
VRIVYGDGSI GAATPYWVGA IKANPNLPAQ IAARLPEPGT VLKTMEGDDV SYGWQVGGSW
QPSENHRFGL AYHSGVELEL SGSAAGLVYT GGQNLDIEGY LPLELPAFAE LSSFHQLSDD
VALHASVNWT QWSVFDRLVA YFPGETKPVG GIESDLVKEE NFKDSWRVAV GSTWNVNKDW
TVRSGFAVDR TAVDDEFRTT TIPDSDRLWF SLGAGYRASE NLTVDMAITY IRAHGFAPID
EHQDLAGLAQ VSFNGEAGGS VWLAGVQLSY KM
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