| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0337 |
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| Symbol | |
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| ID | 4602593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 406008 |
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| End bp | 407420 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639779666 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_926218 |
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| Protein GI | 119773478 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.301995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.508758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA CTCTGTATGA GAAAGTGTGG GACGCCCACC TGGTGGTTGA GCCAGCCGGT
GAAGCGCCCA TCATCTATGT AGACCGGCAT CTGGTGCACG AGGTGACCTC ACCTCAGGCA
TTCAGTGGCC TGAAGATGGC CGGTCGCCCA CTGCGGGCAG TGGAAAAAAC CTTTGCCACC
ATGGATCACA ATACCTCTAC CAAGAGCGCC AGCTTAACAG CATTAAGCCC CATGGCCCGC
ACTCAGGTAG AGACCCTGGC CGACAACTGC CGCGACTTTA ATGTGCGTTT GTACGACATT
CACCATCCCA ATCAAGGCAT TGTGCACGTG ATGGGCCCCG AGCTTGGCAT TACCCTGCCG
GGCACTGTGA TTGTGTGCGG CGACTCCCAC ACCGCCACCC ACGGCGCATT CGGTGCGCTG
GCCTTCGGTA TCGGCACCTC GGAAGTGGAG CACGTACTGG CTACCCAGAC CCTGCGTCAG
CTCAAGGCCA AGACCATGAA AATCGAGGTG CGCGGCAAGG TGGCCGATGG CATCACCGCC
AAGGACATAG TGCTGGCCAT TATTGGTAAA ATCGGCATGG ATGGCGGCAC AGGTTATGTG
GTGGAGTTCT GCGGCGAGGC CATTCGTGAC CTCTCCATGG AGGGGCGTAT GACCCTGTGT
AATATGGCTA TCGAAATGGG TGCCAAGGCC GGTATGGTGG CCCCCGATGA AACCACTTTC
GCTTACCTCG AAGGTCGTGA GTTCGCGCCC AAGGGTGATG CCTGGCAGCA GGCGCTGGCC
GACTGGCGCG AGCTGCACAC GGATGCCGAT GCGGTATTTG ATGCCGAAGT GGTACTGGAA
GCGGCCGCGA TTGCGCCGCA GCTGACCTGG GGCACTAACC CGGGGCAGGT GGTGGCCATC
GATGGCGTGG TGCCAAACCC CGCCGATGAA ACCAATCCCG TGGTGCGCAC CAGCATGGAG
AAGGCACTGG CCTATGTGGA TTTGACCCCG GGCACCCCCA TGACCGATAT CGCCATCAAC
AAGGTGTTTA TCGGCTCCTG CACCAACTCC CGTATCGAAG ACTTGCGCGC TGCGGCGGCG
CAGGCCAAGG GACGCAAGGT TGCCAGTGGC GTAACCGCCA TTGTGGTGCC GGGCTCAGGT
CAGGTAAAAC TGCAGGCCGA GGCCGAGGGC CTGGACAAAA TCTTCCTTGA GGCGGGTTTT
GAGTGGCGCC TGCCGGGCTG CTCCATGTGT TTGGCGATGA ACGATGACAG GCTGGAAGCG
GGCGATCGCT GCGCCTCCAC CAGTAACCGT AACTTTGAAG GACGCCAGGG GCGGGGCAGC
CGCACCCATC TGGTGAGCCC TGCCATGGCC GCTGCGGCCG CGGTTGCCGG TCACTTTGTC
GATATTCGCG TTCACCGTCC TCTGGAGGAT TAA
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| Protein sequence | MAKTLYEKVW DAHLVVEPAG EAPIIYVDRH LVHEVTSPQA FSGLKMAGRP LRAVEKTFAT
MDHNTSTKSA SLTALSPMAR TQVETLADNC RDFNVRLYDI HHPNQGIVHV MGPELGITLP
GTVIVCGDSH TATHGAFGAL AFGIGTSEVE HVLATQTLRQ LKAKTMKIEV RGKVADGITA
KDIVLAIIGK IGMDGGTGYV VEFCGEAIRD LSMEGRMTLC NMAIEMGAKA GMVAPDETTF
AYLEGREFAP KGDAWQQALA DWRELHTDAD AVFDAEVVLE AAAIAPQLTW GTNPGQVVAI
DGVVPNPADE TNPVVRTSME KALAYVDLTP GTPMTDIAIN KVFIGSCTNS RIEDLRAAAA
QAKGRKVASG VTAIVVPGSG QVKLQAEAEG LDKIFLEAGF EWRLPGCSMC LAMNDDRLEA
GDRCASTSNR NFEGRQGRGS RTHLVSPAMA AAAAVAGHFV DIRVHRPLED
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