| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0328 |
|---|
| Symbol | rpmB |
|---|
| ID | 4602584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 395265 |
|---|
| End bp | 395501 |
|---|
| Gene Length | 237 bp |
|---|
| Protein Length | 78 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639779657 |
|---|
| Product | 50S ribosomal protein L28 |
|---|
| Protein accession | YP_926209 |
|---|
| Protein GI | 119773469 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0227] Ribosomal protein L28 |
|---|
| TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000391989 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAGAG TATGCCAAGT TACTGGCAAG CGACCAATGG TTGGTAACAA CCGTTCGCAC
GCAAAGAACG CGACCCGTCG TCGCTTTTTA CCTAACCTGC AGAACCACCG TTTCTGGTTG
GAAACTGAAA AGCGCTTTGT ACAGCTGCGT GTTTCCACTA AAGGTATGCG TATCATCGAT
AAGAAAGGTA TCGAAGTAGT TGTTGCTGAA CTTCGTGCCC GTGGCGAGAA GGTGTAA
|
|---|
| Protein sequence | MSRVCQVTGK RPMVGNNRSH AKNATRRRFL PNLQNHRFWL ETEKRFVQLR VSTKGMRIID
KKGIEVVVAE LRARGEKV
|
|---|
| |