Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0325 |
Symbol | dut |
ID | 4602581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 392676 |
End bp | 393134 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639779654 |
Product | deoxyuridine 5'-triphosphate nucleotidohydrolase |
Protein accession | YP_926206 |
Protein GI | 119773466 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0756] dUTPase |
TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACAC CGATCGAACT GAAAATTCTC GACTCCCGCA TAGGCTCGGA ATTCCCACTG CCGGCCTATG CCACGCCTGG CAGTGCCGGC ATGGACCTTA GAGCCATGTT GGATACCAAC CTGACCATAG CCCCTGGCGA AACCGTGCTC ATACCTACCG GCATCGCCGT GCATGTGGCC GACCCCAGCC TGGCAGCCGT GATCCTGCCC CGCTCCGGTA TGGGCCATAA ACATGGCATA GTACTGGGCA ACCTGGTGGG ACTGATTGAC TCTGACTATC AGGGTCCGCT GATGGTGTCC TGCTGGAACC GCGGCAACGA GCCCTACACC CTGCAAATCG GTGACCGCCT GGCACAACTG GTGTTTGTTC CCGTAGTGCA GGCTGAATTT AAACTGGTGG ACGAGTTCGA CACCTCAATG CGCGGCGAAG GTGGTTTTGG CCATTCAGGC ACCCGCTAA
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Protein sequence | MKTPIELKIL DSRIGSEFPL PAYATPGSAG MDLRAMLDTN LTIAPGETVL IPTGIAVHVA DPSLAAVILP RSGMGHKHGI VLGNLVGLID SDYQGPLMVS CWNRGNEPYT LQIGDRLAQL VFVPVVQAEF KLVDEFDTSM RGEGGFGHSG TR
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