| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0321 |
|---|
| Symbol | pyrE |
|---|
| ID | 4602577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 388412 |
|---|
| End bp | 389053 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639779650 |
|---|
| Product | orotate phosphoribosyltransferase |
|---|
| Protein accession | YP_926202 |
|---|
| Protein GI | 119773462 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0461] Orotate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGCCT ATCAGCGCGA GTTTATTGAG TTTGCTCTCG AGCGTAATGT ACTGAGATTC
GGTGAGTTTA CACTCAAATC CGGCCGCAAG AGCCCTTACT TCTTCAACGC CGGTTTATTT
AATACCGGCC GCGATCTGGC CCGTCTCGGC CGCTTCTATG CCGCTGCGCT GGTGGATGCG
GGTATCGACT ACGATTTGCT GTTTGGCCCC GCTTATAAAG GCATTCCCAT TGCCACCACC
ACGGCGGTAG CCCTGGCCGA GCACCATGAT ATCGACATGC CTTACTGCTT TAACCGTAAA
GAGAAAAAAG ATCACGGTGA AGGTGGTAAC CTGGTGGGCA GCGAGCTCAA GGGTAAGGTT
ATGTTGGTGG ATGATGTGAT CACCGCCGGT ACCGCCATTC GTGAATCGAT GGAAATTATT
CAGGCCAATG GTGCCGAGCT GGCCGGGGTG TTGATTGCGC TGGACCGTCA GGAAAAGGGT
AAGGGCGAGC TGTCTGCCAT TCAGGAAGTG GAGCGTGACT TTGGCTGCGG TATCGTGGCT
ATCATCAAGC TGGCCGATTT GATTGCCTTC CTGGCCGAGA AGCCAGGCAT GGAAGAGGTG
CTGAGCTCGG TACGTGCTTA CCGCGAGCAA TACGGCATTT AA
|
|---|
| Protein sequence | MKAYQREFIE FALERNVLRF GEFTLKSGRK SPYFFNAGLF NTGRDLARLG RFYAAALVDA
GIDYDLLFGP AYKGIPIATT TAVALAEHHD IDMPYCFNRK EKKDHGEGGN LVGSELKGKV
MLVDDVITAG TAIRESMEII QANGAELAGV LIALDRQEKG KGELSAIQEV ERDFGCGIVA
IIKLADLIAF LAEKPGMEEV LSSVRAYREQ YGI
|
|---|
| |