Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0319 |
Symbol | |
ID | 4602575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 386521 |
End bp | 387450 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639779648 |
Product | hypothetical protein |
Protein accession | YP_926200 |
Protein GI | 119773460 |
COG category | [S] Function unknown |
COG ID | [COG1561] Uncharacterized stress-induced protein |
TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTGG CCTGGCTTGT GGTTATAATG ACGTCCAGAC TTAGCCGAAA ATCAGCCGGA ATCCCTATGA TCCACAGCAT GACCGCCTAT GCCCGTATCG AGCATAAATC CTCCTGGGGC AACGCCTCTT TTGAAATCCG CTCAGTGAAT CAGCGCTATC TGGAAACCTA CCTGCGCTTG CCAGAGCAGC TGCGCAGCCT CGAACCAGCG CTGCGCGAAC GCTTAAGAAA GCGCCTCAGC CGTGGAAAAG TAGAAGTGAA TCTGCGCTAT GACGTCGCCA ACGACTCAGG CGCCGAACTG AGCATCAACC AAGACCTCGC CCGTCAACTG CTGGGCGCTG CCAATTGGCT TAAAGCCGAA GCCGGACAGG GTGATATTGC GCTGACTGAT ATACTCCGCT GGCCCGGTGT TATCGCCACC GCCGAGCAGG ACATGGATGC CATCAGCGCC GAGCTGTTGG GGGCCTTCGA TAAGGCACTG GATCAGTTTG TGGAAGCCCG TGGCCGTGAA GGCAGCGCCA TCAAGGAAAT GCTCGAAAGC CGCCTTGGTG CCGTGGAAGG TCAAATTGCC ATTGTGCGCG AGCACATGCC AAAGGTCATT GAATGGCAAC GTGAAAAACT CACATCCCGG CTTGCAGAGA TTCAGGGTGA GCTCGACAGC ACCCGTATCG AGCAGGAAAT GGTGCTGCTG GCGCAAAAAC TCGACGTGGC CGAAGAAATG GACCGCCTTG AAGCGCACAT CACCGAAGCT CGCCGCATCC TCAAGAAGGG TGGCAGCGAA GGTCGCCGCC TCGACTTTAT GATGCAGGAG TTCAACCGCG AGTCGAACAC CCTCGCCTCC AAGTCCATCA GCACAGAAAT CACAGCTGCC GCCGTGGAGC TCAAAGTACT TATCGAGCAG ATGCGCGAAC AGATCCAAAA CGTAGAGTGA
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Protein sequence | MTLAWLVVIM TSRLSRKSAG IPMIHSMTAY ARIEHKSSWG NASFEIRSVN QRYLETYLRL PEQLRSLEPA LRERLRKRLS RGKVEVNLRY DVANDSGAEL SINQDLARQL LGAANWLKAE AGQGDIALTD ILRWPGVIAT AEQDMDAISA ELLGAFDKAL DQFVEARGRE GSAIKEMLES RLGAVEGQIA IVREHMPKVI EWQREKLTSR LAEIQGELDS TRIEQEMVLL AQKLDVAEEM DRLEAHITEA RRILKKGGSE GRRLDFMMQE FNRESNTLAS KSISTEITAA AVELKVLIEQ MREQIQNVE
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