Gene Sama_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0319 
Symbol 
ID4602575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp386521 
End bp387450 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content56% 
IMG OID639779648 
Producthypothetical protein 
Protein accessionYP_926200 
Protein GI119773460 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGG CCTGGCTTGT GGTTATAATG ACGTCCAGAC TTAGCCGAAA ATCAGCCGGA 
ATCCCTATGA TCCACAGCAT GACCGCCTAT GCCCGTATCG AGCATAAATC CTCCTGGGGC
AACGCCTCTT TTGAAATCCG CTCAGTGAAT CAGCGCTATC TGGAAACCTA CCTGCGCTTG
CCAGAGCAGC TGCGCAGCCT CGAACCAGCG CTGCGCGAAC GCTTAAGAAA GCGCCTCAGC
CGTGGAAAAG TAGAAGTGAA TCTGCGCTAT GACGTCGCCA ACGACTCAGG CGCCGAACTG
AGCATCAACC AAGACCTCGC CCGTCAACTG CTGGGCGCTG CCAATTGGCT TAAAGCCGAA
GCCGGACAGG GTGATATTGC GCTGACTGAT ATACTCCGCT GGCCCGGTGT TATCGCCACC
GCCGAGCAGG ACATGGATGC CATCAGCGCC GAGCTGTTGG GGGCCTTCGA TAAGGCACTG
GATCAGTTTG TGGAAGCCCG TGGCCGTGAA GGCAGCGCCA TCAAGGAAAT GCTCGAAAGC
CGCCTTGGTG CCGTGGAAGG TCAAATTGCC ATTGTGCGCG AGCACATGCC AAAGGTCATT
GAATGGCAAC GTGAAAAACT CACATCCCGG CTTGCAGAGA TTCAGGGTGA GCTCGACAGC
ACCCGTATCG AGCAGGAAAT GGTGCTGCTG GCGCAAAAAC TCGACGTGGC CGAAGAAATG
GACCGCCTTG AAGCGCACAT CACCGAAGCT CGCCGCATCC TCAAGAAGGG TGGCAGCGAA
GGTCGCCGCC TCGACTTTAT GATGCAGGAG TTCAACCGCG AGTCGAACAC CCTCGCCTCC
AAGTCCATCA GCACAGAAAT CACAGCTGCC GCCGTGGAGC TCAAAGTACT TATCGAGCAG
ATGCGCGAAC AGATCCAAAA CGTAGAGTGA
 
Protein sequence
MTLAWLVVIM TSRLSRKSAG IPMIHSMTAY ARIEHKSSWG NASFEIRSVN QRYLETYLRL 
PEQLRSLEPA LRERLRKRLS RGKVEVNLRY DVANDSGAEL SINQDLARQL LGAANWLKAE
AGQGDIALTD ILRWPGVIAT AEQDMDAISA ELLGAFDKAL DQFVEARGRE GSAIKEMLES
RLGAVEGQIA IVREHMPKVI EWQREKLTSR LAEIQGELDS TRIEQEMVLL AQKLDVAEEM
DRLEAHITEA RRILKKGGSE GRRLDFMMQE FNRESNTLAS KSISTEITAA AVELKVLIEQ
MREQIQNVE