| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0265 |
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| Symbol | rpoZ |
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| ID | 4602521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 304957 |
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| End bp | 305235 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639779594 |
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| Product | DNA-directed RNA polymerase subunit omega |
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| Protein accession | YP_926146 |
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| Protein GI | 119773406 |
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| COG category | [K] Transcription |
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| COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
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| TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCGCG TAACTGTAGA AGACGCCGTT AAGCAAATCG GCAACCGTTT TGACATGATC
CTGGTTGCGG CGCGTCGTGC CCGTCAAATC GCCGTTCAGG GCAAAGACCC CATGGTGGAA
GAGCAGAACG ACAAACCAAC GGTTATCGCC CTGCGCGAAA TCGAAAAAGG CCTGGTTAAC
GCCGGCACTC TGGACGCCGA TGAGCGTCAG AGCGTGCGCG AGCGCGAAGC GGCTGAAATC
GCTGCCGTTG CCGCGATTGC AGAAGGTCGT TCTCTCTAA
|
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| Protein sequence | MARVTVEDAV KQIGNRFDMI LVAARRARQI AVQGKDPMVE EQNDKPTVIA LREIEKGLVN
AGTLDADERQ SVREREAAEI AAVAAIAEGR SL
|
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