Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0263 |
Symbol | |
ID | 4602519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 302424 |
End bp | 302807 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639779592 |
Product | YjgF-like protein |
Protein accession | YP_926144 |
Protein GI | 119773404 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.668867 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAA AAACCATTAT CGCCACCGAC AAGGCTCCTG CGGCTATCGG TACCTATTCC CAGGCCGTAA AGGTCGGCTC TACCGTGTAT CTGTCTGGTC AGATCCCTCT GGATCCCGCC ACCATGACCC TGGTCGGCGA CGACTTTGAA GCCCAAACAG TGCAGGTATT TGAAAACCTC AAGGCCGTAT GTGAAGCCGC CGGCGGCAGC TTTGCCGACA TCGCCAAGCT GAATATCTTC CTCACTGACC TGTCGAACTT CGCCAAGGTG AATGAGATCA TGGGCCGTTA TTTCAACGAG CCCTACCCTG CCCGCGCCGC CATCGGCGTA AAAGAGCTGC CACGTGGCTC ACAGGTAGAA ATGGATGGGG TGATGGAGCT GTAA
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Protein sequence | MAEKTIIATD KAPAAIGTYS QAVKVGSTVY LSGQIPLDPA TMTLVGDDFE AQTVQVFENL KAVCEAAGGS FADIAKLNIF LTDLSNFAKV NEIMGRYFNE PYPARAAIGV KELPRGSQVE MDGVMEL
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