| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0239 |
|---|
| Symbol | rplQ |
|---|
| ID | 4602495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 265107 |
|---|
| End bp | 265502 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639779560 |
|---|
| Product | 50S ribosomal protein L17 |
|---|
| Protein accession | YP_926120 |
|---|
| Protein GI | 119773380 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0203] Ribosomal protein L17 |
|---|
| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00616795 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000909756 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCATC GTAAGAGTGG TCGTCAACTT AACCGCAACA GCAGCCACCG TCAGGCTATG
TTCCGCAACA TGGCTTCTTC ACTGGTACGT CACGAGATCA TCAAGACTAC CGCTGTGAAG
GCGAAAGAAC TGCGTCGCGT AGTTGAGCCC CTGATTACAC TCGCTAAGAG TGATAGCGTT
GCAAATCGCC GTTTGGCATT TGCTCGCACC CGCGATCAAG AAGTCGTTGG TAAACTGTTC
AACGAATTGG GTCCACGTTA CCAGGAGCGT CCTGGTGGTT ACACCCGTAT TCTGAAGTGC
GGTCTGCGTG CCGGTGATAA AGCCCCTATG GCTTACATCG AGCTGGTTGG TCGCCCAGAA
GCTGCTCAAG CTGTTGAAGT TGAAGCCGCT GAGTAA
|
|---|
| Protein sequence | MRHRKSGRQL NRNSSHRQAM FRNMASSLVR HEIIKTTAVK AKELRRVVEP LITLAKSDSV
ANRRLAFART RDQEVVGKLF NELGPRYQER PGGYTRILKC GLRAGDKAPM AYIELVGRPE
AAQAVEVEAA E
|
|---|
| |