Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0225 |
Symbol | rplE |
ID | 4602481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 257717 |
End bp | 258256 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639779546 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_926106 |
Protein GI | 119773366 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000033393 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000847343 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCGAAAC TGCATGATAA ATACAAAGAG ACTGTGATCG CTGAACTGTC TAAAAAGTTC GGTTATACCA GTGTCATGCA AGTCCCTCGG ATTGAGAAAA TCACCCTGAA CATGGGTGTT GGCGAAGCTG TTGCTGACAA GAAAATCATG GAAAACGCTG TCCGTGATAT GACTGCAATC GCTGGCCAGA AGCCAGTTGT GACTGTAGCT CGTAAGTCAG TCGCTGGTTT CAAAATCCGT GAAGGCTACC CTATTGGCTG CAAAGTAACC CTGCGCGGTG AGCGTATGTG GGAATTCTTT GAGCGTCTGC TGGATATCGC AATCCCTCGT ATCCGTGACT TCCGTGGTCT GAGCGCTAAG TCGTTCGACG GCCGTGGTAA CTACGCGATG GGCGTGCGTG AGCAAATCAT CTTCCCTGAG ATCGACTATG ACAAGATCGA TCGCGTTCGT GGTATGGACA TTGTGATCAC CACAACCGCC AAGAACGATG AGGAAGGTCG TGCTCTTCTG GACGCTTTTA ACTTCCCATT CAAGAAATAA
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Protein sequence | MAKLHDKYKE TVIAELSKKF GYTSVMQVPR IEKITLNMGV GEAVADKKIM ENAVRDMTAI AGQKPVVTVA RKSVAGFKIR EGYPIGCKVT LRGERMWEFF ERLLDIAIPR IRDFRGLSAK SFDGRGNYAM GVREQIIFPE IDYDKIDRVR GMDIVITTTA KNDEEGRALL DAFNFPFKK
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