Gene Sama_0224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0224 
SymbolrplX 
ID4602480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp257390 
End bp257704 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content46% 
IMG OID639779545 
Product50S ribosomal protein L24 
Protein accessionYP_926105 
Protein GI119773365 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0198] Ribosomal protein L24 
TIGRFAM ID[TIGR01079] ribosomal protein L24, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.6996e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value7.23515e-06 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCAGCAA AAATCCGTCG TGAAGACGAA GTGATTGTAC TGACCGGTAA AGATAAAGGT 
AAGCGTGGCA AAGTGACTCG CGTACTGGTT ACCGGCAAGG TAGTTGTTGA AGGCATCAAT
CTCGTTAAGA AGCACACCAA GCCAAACCCA CAACTGGGTA TCACTGGTGG CATCGTAGAG
AAAGAAGCTG CGATTCAAGT ATCAAATGTG GCGATCTTTA ACCCTGCTAC TGGCAAGGCG
GATCGTGTAG GTTTCCGATT TGAAGACGGC AAGAAAGTAC GTTTCTTCAA ATCGAATGGT
GAACTCGTTA AGTAA
 
Protein sequence
MAAKIRREDE VIVLTGKDKG KRGKVTRVLV TGKVVVEGIN LVKKHTKPNP QLGITGGIVE 
KEAAIQVSNV AIFNPATGKA DRVGFRFEDG KKVRFFKSNG ELVK