| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0219 |
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| Symbol | rpsC |
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| ID | 4602475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 255284 |
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| End bp | 255976 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639779540 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_926100 |
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| Protein GI | 119773360 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000284252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000795871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGGACAGA AAGTACATCC TAATGGTATC CGTCTGGGTA TCACCAAGCC TTGGATCTCT
ACCTGGTACG CCGATAAGTC AGATTATGCA AATAACCTGC ACAGCGACTG GGAAGTGCGT
AAGTTTCTGG AAAAGAAACT GGAAGCCGCA TCAGTTTCCA AGATCGTGAT TGAACGCCCA
GCGAAAAGCA TCCGCGTTAC CATCCACACT GCCCGTCCAG GCGTTGTGAT TGGTAAGAAG
GGTGAAGATG TTGAAGTACT GCGCGCTGAA GTTGCCAAGA TTTCTGGCAC TCCTGCCCAA
ATTAACATCG CTGAGATCCG TAAGCCTGAG CTGGACGCTA AGCTGGTTGC CGATTCTATC
GCCCAACAGC TGGAGCGTCG CGTAATGTTC CGTCGTGCTA TGAAGCGCGC TGTACAGAAC
GCCATGCGCA TCGGTGCACA AGGTATCAAA GTTGAAGTTA GTGGCCGTCT CGGCGGCGCT
GAGATTGCGC GTACCGAATG GTACCGTGAA GGTCGTGTGC CTCTGCACAC ACTGCGTGCT
GATATCGACT ACGCTACTTC TGAGAGTCAC ACCACCTACG GTGTGATCGG CATTAAAGTT
TGGGTCTTCA AAGGTGAAGT TCTGGACGGC ATGCTGCCTC AGGTAGAAGA GCCGAAACAG
CAGCAACCTA AGCGCAAGCC TCGTGGTAAA TAG
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| Protein sequence | MGQKVHPNGI RLGITKPWIS TWYADKSDYA NNLHSDWEVR KFLEKKLEAA SVSKIVIERP
AKSIRVTIHT ARPGVVIGKK GEDVEVLRAE VAKISGTPAQ INIAEIRKPE LDAKLVADSI
AQQLERRVMF RRAMKRAVQN AMRIGAQGIK VEVSGRLGGA EIARTEWYRE GRVPLHTLRA
DIDYATSESH TTYGVIGIKV WVFKGEVLDG MLPQVEEPKQ QQPKRKPRGK
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