| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0215 |
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| Symbol | rplW |
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| ID | 4602471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 253490 |
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| End bp | 253792 |
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| Gene Length | 303 bp |
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| Protein Length | 100 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639779536 |
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| Product | 50S ribosomal protein L23 |
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| Protein accession | YP_926096 |
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| Protein GI | 119773356 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0089] Ribosomal protein L23 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000957762 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000693674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGATCCGCG AAGAGCGTTT ACTGAAAGTT ATCCTGGCAC CACACATCTC TGAAAAGAGC
ACCGTGGTTG CTGAGAAGAC CAACACTGTA GTTTTCCGTG TAGCTATCGA TGCCACCAAG
AGTGAAATCA AAGCTGCCGT TGAGAAACTG TTCGAAGTTG AAGTTGCTGG TGTGCGCACC
CTGATCAACA AAGGCAAAAC CAAGCGTCAC GGTGCCCGTG TAGGCCGTCG TAGCGATTGG
AAAAAAGCCT ATGTGACTCT GGCTGCCGGT GCTGACATCG ACTTCGTTGG CGCTGAAGCG
TAA
|
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| Protein sequence | MIREERLLKV ILAPHISEKS TVVAEKTNTV VFRVAIDATK SEIKAAVEKL FEVEVAGVRT
LINKGKTKRH GARVGRRSDW KKAYVTLAAG ADIDFVGAEA
|
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