Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0210 |
Symbol | |
ID | 4602466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 248164 |
End bp | 250260 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639779531 |
Product | elongation factor G |
Protein accession | YP_926091 |
Protein GI | 119773351 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000406039 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000140529 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | GTGGCTCGTA CAACTCCCAT TGAGCGTTAC CGTAACATCG GTATCTGTGC TCATGTTGAT GCAGGCAAAA CTACCACCAC CGAGCGTGTG CTGTTTTACA CTGGCCTGTC TCATAAAATC GGTGAAGTAC ACGATGGTGC CGCGACCACT GACTGGATGG TTCAGGAGCA GGAACGTGGT ATTACCATTA CCTCGGCTGC CGTAACCACC TTCTGGCGCG GTATGGACGC TCAGTTCACC GAACACCGCA TCAACATCAT CGACACCCCC GGACACGTTG ACTTCACCAT TGAAGTAGAG CGCTCTTTGC GCGTACTCGA CGGTGCTGTC GTGGTTTTCT GTGGCGCCTC AGGCGTTGAG CCTCAGTCAG AGACTGTATG GCGTCAGGCC AACAAGTACG GCGTGCCACG CATGGTGTTC GTTAACAAGA TGGACCGTGC CGGTGCTGAC TTCGATCGCG TATGCAACCA GATCCGTAAA CGTCTGGGTG CTACCTGTGT CCCTATCCAA TTGAACATTG GTGCGGAAGA ACACTTCAAA GGCGTGATTG ACCTTATCAA GATGAAAGCC ATCAACTGGA ACGAAGCGGA CCAGGGGATG ACCTTCACCT ATGAAGACAT TCCTGCGGAT CTCCTGGATA AAGCCACAGA GATGCGCGAG TACCTGGTAG AAAGTGCCGC CGAAGCGACA GAAGAGCTGA TGGAAAAGTA CCTGGAAACA GGTGAACTGA CCGAAGCTGA AATCAAGGCC GCACTGCGCC AGCGTACTAT CAACAACGAA ATCGTTCTGG CCACCTGTGG CAGTGCCTTT AAGAATAAAG GCGTGCAAGC CGTGCTGGAC GCGGTTGTTG AGTACTTGCC AGCCCCGGTC GATGTACCTG CTATCAAGGG CATCGATGAT TACGAGAAAG AAGTTGAGCG TCATGCCGAC GACAATGCAC CTTTCTCCGC GCTGGCATTC AAGATTGCGA CTGACCCATT CGTGGGTACC TTGACCTTTA TTCGTGTTTA CTCTGGCGTG CTGGAATCCG GTGCGTCTGT GTACAACTCG GTCAAGCAAA AGCGTGAGCG TATCGGTCGT ATCGTGCAGA TGCACGCCAA CGATCGTACT GAACTCAAAG AAGTACGTGC CGGTGATATT GCCGCCGCTA TTGGTCTGAA AGAAGTCACT ACGGGTGATA CCCTGTGTGA TTCAGACAAT AAGGTAGTCC TGGAGCGTAT GGAGTTTCCA GAGCCTGTGA TCACAATTGC CGTGGAGCCA CGCTCCAAGG CCGACCAGGA CAAGATGGGT ATCGCGCTGC AAAAGCTGGC AGCCGAAGAT CCGTCTTTCC GGGTTGAGAC TGACGCTGAG TCTGGTCAAA CTCTGATTTC CGGTATGGGT GAGCTACACT TGGACATTAT CGTTGACCGT ATGCGTCGCG AGTTTAACGT CGAGTGTAAC GTGGGTAAGC CTCAGGTGGC CTACCGCGAA ACTATCCGTG CCAAGGTCGA AGCCGAAGGT AAGTTCGTAC GTCAATCCGG TGGTCGTGGC CAATTTGGTC ATGTCTGGTT GCGTATCGAG CCCAACGAAG ACGGCGCCGG CTATGAATTT GTCAACGAAA TCGTGGGTGG TGTGGTTCCA AAGGAATACA TCCCTGCCGT TGACAAGGGT ATCCAGGAGC AGATGAAGAA CGGCGTACTC GCCGGCTTCC CTGTGCTGGA CGTGAAGGTC ACCCTGTTCG ATGGCTCCTA CCACGATGTG GACTCGAACG AAATGGCCTT CAAAGTTGCA GGTTCAATGG GCTTCAAAAA GGGCGCGCTC GAGGCGAACC CTGTGTTGCT CGAGCCTTGC ATGAAGGTAG AGGTAACTAC CCCTGAAGAC TACATGGGTG ACGTAGTAGG TGATCTGAAC CGTCGTCGTG GTCTGATTGA AGGTATGGAC GATGGCGTCG GTGGCGTTAA GATAGTCCAT GCCGTTGTGC CTCTGTCTGA AATGTTTGGT TATGCGACTG ATTTGCGCTC TGCAACTCAG GGTCGTGCGT CATACTCCAT GGAGTTCTTT AAGTACGCCG ACGCGCCGCA GAACATAGCA AAGGCAGTTA TTGAAGCCCG CAGCTGA
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Protein sequence | MARTTPIERY RNIGICAHVD AGKTTTTERV LFYTGLSHKI GEVHDGAATT DWMVQEQERG ITITSAAVTT FWRGMDAQFT EHRINIIDTP GHVDFTIEVE RSLRVLDGAV VVFCGASGVE PQSETVWRQA NKYGVPRMVF VNKMDRAGAD FDRVCNQIRK RLGATCVPIQ LNIGAEEHFK GVIDLIKMKA INWNEADQGM TFTYEDIPAD LLDKATEMRE YLVESAAEAT EELMEKYLET GELTEAEIKA ALRQRTINNE IVLATCGSAF KNKGVQAVLD AVVEYLPAPV DVPAIKGIDD YEKEVERHAD DNAPFSALAF KIATDPFVGT LTFIRVYSGV LESGASVYNS VKQKRERIGR IVQMHANDRT ELKEVRAGDI AAAIGLKEVT TGDTLCDSDN KVVLERMEFP EPVITIAVEP RSKADQDKMG IALQKLAAED PSFRVETDAE SGQTLISGMG ELHLDIIVDR MRREFNVECN VGKPQVAYRE TIRAKVEAEG KFVRQSGGRG QFGHVWLRIE PNEDGAGYEF VNEIVGGVVP KEYIPAVDKG IQEQMKNGVL AGFPVLDVKV TLFDGSYHDV DSNEMAFKVA GSMGFKKGAL EANPVLLEPC MKVEVTTPED YMGDVVGDLN RRRGLIEGMD DGVGGVKIVH AVVPLSEMFG YATDLRSATQ GRASYSMEFF KYADAPQNIA KAVIEARS
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