Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0208 |
Symbol | rpsL |
ID | 4602464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 247158 |
End bp | 247532 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639779529 |
Product | 30S ribosomal protein S12 |
Protein accession | YP_926089 |
Protein GI | 119773349 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0048] Ribosomal protein S12 |
TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000137299 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000763444 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGGCAACTG TAAATCAGTT GGTACGTAAG CCACGTGCAC CTAAAGTCGA CAAGACTAAC GTGCCAGCGC TGGAAGCGTG CCCACAGAAG CGTGGTGTTT GTACTCGTGT GTACACCACC GCCCCTAAGA AACCAAACTC TGCACTGCGT AAAGTAGCTC GTGTGCGTTT GACCAACGGT TTTGAAGTTA CTTCATACAT CGGCGGTGAA GGCCACAACC TGCAGGAACA CAGTGTGATT CTGATCCGTG GCGGTCGTGT TAAAGACCTG CCAGGTGTGC GTTATCACAC CATTCGTGGC GCTCTGGACT GTGCTGGTGT GAACGCTCGC CGCCAGGCTC GTTCTAAGTA CGGTGCCAAG CGTCCTAAGT CTTAA
|
Protein sequence | MATVNQLVRK PRAPKVDKTN VPALEACPQK RGVCTRVYTT APKKPNSALR KVARVRLTNG FEVTSYIGGE GHNLQEHSVI LIRGGRVKDL PGVRYHTIRG ALDCAGVNAR RQARSKYGAK RPKS
|
| |