| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0194 |
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| Symbol | |
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| ID | 4602450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 222531 |
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| End bp | 223331 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639779505 |
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| Product | glutamate racemase |
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| Protein accession | YP_926075 |
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| Protein GI | 119773335 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0796] Glutamate racemase |
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| TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000010481 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0134241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGTTTG GCTTGGCACG TCCCATTCTG GTTTTCGATT CAGGTATAGG TGGTTTGTCG
GTGTTGTCTG AGATACGGCA GCTATTGCCA TCCAATGACT TCTATTACCT GTTTGATAAT
GCGCGCCTGC CATACGGTGA ACTTACCGAG CAGGTGCTGG TGGACGGCTG TGTTGAGCTT
GTTGTGTCAG CAGCTACCAA AATCAACGCC GCTCTGGTGG TTATCGCCTG TAATACGGCC
AGTACGCTGG TGTTGCCTGT TTTAAGGAGC AAGTTGACGA TACCCGTCGT AGGAGTCGTT
CCTGCAATCA AACCTGCCGC AAGTCATACT CTCTCTGGTC ATATAGGCCT ACTCGCTACT
CCAGCCACGG TAAAGCGTTC TTACACCCAT GAGCTGGTCA CCAAATTTGC CAGTGATTGT
CAGGTGCATA TGTTTGGCAG TTCGGAACTG GTGATGATGG CAGAGCAAAA GATGGCTGGA
GTGCCTGTAG ACATGGAGAA GTTAACCGGA ATTCTGGCGC CCATCCAGGC AACGCAAGTG
GATGTGTTGG TACTGGGATG TACGCATTTT CCCATGTTGG CATACGAATT ATCCCAGATA
TTGGGGCCCG GGATTAAACT GCTCGATTCG GGCTTTGCCA TTGCCAGCAG GGTGCAGCAT
GTACTGGAGG GCTTGGGTGA GCATCAGCAT CCTGCGCCAA ATAGTATGAA GGCGTGGTAT
ACCACGCCTT CACTGACACT GGGCTTAATC CAAAGCCTGA CAGACTATGG ATTCAGCGAA
ATAGCGCCTT TTACCCATTG A
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| Protein sequence | MEFGLARPIL VFDSGIGGLS VLSEIRQLLP SNDFYYLFDN ARLPYGELTE QVLVDGCVEL
VVSAATKINA ALVVIACNTA STLVLPVLRS KLTIPVVGVV PAIKPAASHT LSGHIGLLAT
PATVKRSYTH ELVTKFASDC QVHMFGSSEL VMMAEQKMAG VPVDMEKLTG ILAPIQATQV
DVLVLGCTHF PMLAYELSQI LGPGIKLLDS GFAIASRVQH VLEGLGEHQH PAPNSMKAWY
TTPSLTLGLI QSLTDYGFSE IAPFTH
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