| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0193 |
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| Symbol | |
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| ID | 4602449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 221311 |
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| End bp | 222408 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639779504 |
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| Product | tRNA (uracil-5-)-methyltransferase |
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| Protein accession | YP_926074 |
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| Protein GI | 119773334 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000703942 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0139057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAC AAGCCATGGA CCCTCAACAG TACGAGCAGC AGCTTGAGCA AAAGTGCCAG
GCACTGACTG AGGCATTTGC CCACTATAAT CCACCGGCTC TGGAAGTATT CCCATCTGCC
CCAGCCCATT ATCGGATGCG CTGTGAATTC CGGGTGTGGC ACGATGGCGA CGACCTCTAC
TACTGTATGT TCGACAACGT GGCAAAAGAA AAGGTACGTA CCGATCAGTT TTTGCCAGCC
AGCGAACTCA TCAACCGCAT GATGCCTGCC CTGCTGGACG AACTTCGCCC CAATCGCGCC
CTGCGCCACA AGCTGTTCCA GGTAGACTTC TTGTCTACCC TGAGTGGCGA GATTCTGGTC
AGTCTCTTGT ATCACCGCCA GTTGGACGAT CAATGGCTCA CTGAAGCCCG TGCGCTCAAG
GCGCGTCTGG GCGAGCACTT TAAAGTCGAC ATTATTGGCC GTGCCCGCAA ACAAAAATTT
GTGCTCGACC GCGACTTTGT AGTTGAGTCA CTCGATGTGG ATGGTAAGAC CCTGCACTAT
AAGCAGGTAG AGAACAGCTT TACTCAGCCC AATGCAGGTG TGGCGGTTAA GATGTTGGAA
TGGGCGCTGG ATGCCACCAA ACAAAGTAGT GGTGACTTGC TGGAGCTTTA CTGTGGTAAC
GGCAACTTTT CCATCGCTTT GGCACCAAAC TTTGGCAAGG TACTGGCGAC TGAACTGGCC
AAACCCTCTG TAGAAGCGGC TCAGTACAAT ATTCAAGTCA ATAAGGTAAG TAATCTCGAT
ATCGTCCGTA TGTCAGCGGA AGAATTCACC GAAGCCATGA AAGGTGAAAA GCGTTTCAAC
CGTCTTGGCG ACATTGATTT ACAAAGCTAC CAGTGCAACA CCATCTTTGT GGATCCACCC
AGAGCGGGCC TGGATGATGA GACCGTTAAG CTGGTTCAGG GTTACGAGAA CATTCTCTAT
ATCTCCTGCA ATCCCGATAC TCTGAATGAT AACCTCAAGG TACTTAGCGA AACTCACGAA
GTAGTGCGCT TTGCGCTGTT CGATCAGTTC CCTTATACCC ATCACACAGA AGCCGGCGTG
ATGCTTAAAC GCCGCTGA
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| Protein sequence | MNAQAMDPQQ YEQQLEQKCQ ALTEAFAHYN PPALEVFPSA PAHYRMRCEF RVWHDGDDLY
YCMFDNVAKE KVRTDQFLPA SELINRMMPA LLDELRPNRA LRHKLFQVDF LSTLSGEILV
SLLYHRQLDD QWLTEARALK ARLGEHFKVD IIGRARKQKF VLDRDFVVES LDVDGKTLHY
KQVENSFTQP NAGVAVKMLE WALDATKQSS GDLLELYCGN GNFSIALAPN FGKVLATELA
KPSVEAAQYN IQVNKVSNLD IVRMSAEEFT EAMKGEKRFN RLGDIDLQSY QCNTIFVDPP
RAGLDDETVK LVQGYENILY ISCNPDTLND NLKVLSETHE VVRFALFDQF PYTHHTEAGV
MLKRR
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