| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0187 |
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| Symbol | |
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| ID | 4602443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 213866 |
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| End bp | 215722 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779498 |
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| Product | acyltransferase family protein |
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| Protein accession | YP_926068 |
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| Protein GI | 119773328 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0791415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTCA GTCGCCGCTT TTTGCCCTAT TTTTTGACCC AGTGCCTGGG TGCACTCAAC
GACAATATAT ACAAGAATGT CCTCTTGCTG CTGGTGGCTT ACAGTCAGGT CGACAAGTTG
CCCATGGATC CCAACTTGTT TGTAAATCTT GCGGCGGGCG TGTTTATCCT GCCGTTTTTC
CTGTTTTCAG CCCATGCCGG CGGCATCGCC GATAACATGG ATAAGGCGAA GCTGATCCGT
CGGCTCAAAC TGCTGGAGCT GGGCATTATG TCCTGTGCCG CGGTCGCCCT GGTTACCGAG
CACTATCTTG CGATGCTCCT GCTGCTGTTT ATGACCGGCA GTCAATCGGC CTATTTTGGC
CCGGTTAAAT ACTCCCTGTT GCCACAGGCA TTGAAAGAAG AAGAGTTGGT GAGCGGCAAT
GCCTGGGTCG AAATGGGCAC CTTTTTATCC ATTTTGGTGG GTACCCTGAG CGCTGGCTTG
CTGGTTGCCA ACGAGGGGGC AACCTGGCTT GCAGCCATCA CAGTGGCAAC CCTGTCGCTG
GCGGGCTATC TCAGCAGCCG CGCCATTCCG GCTTTGCCTC CCCAGAATAA GGTGCACAAA
GTAAAGTTTG CGCCCCTGTC AGGTACCTGG CGCAGTGTAC AGCGGGTAAG GCGTACTCCC
ACCATATGGA TGGCGATTCT GGCCATCAGT TGGTTTTGGT TTTTGGGGGC CACTTATCTC
ACCCAGTTCC CCAACTTCGC CCGTGAACAT CTGCATGGCG ATGCCACAGT CGTTTCTGTG
CTGCTGGCAC TCTTTTCCAT CGGCATTGCC GTGGGCTCGT TTTTGTGTGA GCGCATTTCC
TTTGGCCGGG TGGAGCTCGG CGTTTTGCCC TTTGGTGTGG CCGGTTTAAC CCTGTTTGGG
GTGGATATGT TATTTGCTCT GCCGGGATTT GCTGCACCTC AGTCACTTTA TGGTGCGGTC
GAGTTTGTGC AGCTGAGTGC CCACTGGCGA CTGATGTTTG ACCTCTTTAT GGTGGGTATC
AGTGGTGGTC TCTTTATCGT TCCCCTGTAT GCCTTTATCC AAACCCGTGC CGCCAGTGGT
GAATGTGCCC GCGCCATTGC GGCAAACAAC ATTGTCAATG CCTTCTTTAT GGTGGTATCG
GCACTGTTGT CTATGTTGCT GCTTGGCCCG GTTGGCCTTG GCATACTCGA ACTCTTTTTA
CTGCTGGCAC TGATGAATGC CGTGGTGGCC TTCTATGTTT ATCGCCAGGT GCCGGAATTT
GCACAGCGTT TTATCTCGTA TTTGCTCAGT CACCTGATGT ATCGGGTATC CATCAGCGGC
AGGCAACATA TTCCCAAAGA AGGCGCGGCG CTGATGGTGT GCAACCATGT CAGTTATGTC
GATGCCTTAT TGCTGCTGGG GGCTTCAACC CGGCCGGTCC GTTTTGTGAT GGACAAGAGC
ATCAGCGAAA TGCCGCTGCT AAAGTACCTG TTCCGTCATG CCGGGGTCAT TCCAATCTGC
TCGCCCAAAC AATGTGAGGC TACCTATAAC GCTGCCTTTG AGCGTATCGA CGAGGCGCTG
ATGGATGGAG AGTTAGTGTG TATCTTTCCC GAAGGCAGAC TGTCGCCAGA TGGTGTATTG
GGTGAGTTCA GACCCGGGGT AGAGAAGATT CTCTCCCGGC GGCCCGTGCC GGTCGTTCCC
ATGGCGCTCA AAGGCTTATG GGGCTCTTTC TTCAGCCATA AAGATGGTCA TGCATTGACG
ACACGCCCCA AGCGTTTCTG GTCAAAGGTT GAGATTGAAA TAGCACCGGC AGTGGATGGG
GCTAGCTGCG ACAGACACTC GTTGCAGGCT ACTGTTTCTG AATTAATTGG TATGTAA
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| Protein sequence | MIFSRRFLPY FLTQCLGALN DNIYKNVLLL LVAYSQVDKL PMDPNLFVNL AAGVFILPFF
LFSAHAGGIA DNMDKAKLIR RLKLLELGIM SCAAVALVTE HYLAMLLLLF MTGSQSAYFG
PVKYSLLPQA LKEEELVSGN AWVEMGTFLS ILVGTLSAGL LVANEGATWL AAITVATLSL
AGYLSSRAIP ALPPQNKVHK VKFAPLSGTW RSVQRVRRTP TIWMAILAIS WFWFLGATYL
TQFPNFAREH LHGDATVVSV LLALFSIGIA VGSFLCERIS FGRVELGVLP FGVAGLTLFG
VDMLFALPGF AAPQSLYGAV EFVQLSAHWR LMFDLFMVGI SGGLFIVPLY AFIQTRAASG
ECARAIAANN IVNAFFMVVS ALLSMLLLGP VGLGILELFL LLALMNAVVA FYVYRQVPEF
AQRFISYLLS HLMYRVSISG RQHIPKEGAA LMVCNHVSYV DALLLLGAST RPVRFVMDKS
ISEMPLLKYL FRHAGVIPIC SPKQCEATYN AAFERIDEAL MDGELVCIFP EGRLSPDGVL
GEFRPGVEKI LSRRPVPVVP MALKGLWGSF FSHKDGHALT TRPKRFWSKV EIEIAPAVDG
ASCDRHSLQA TVSELIGM
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