| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0184 |
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| Symbol | |
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| ID | 4602440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 211849 |
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| End bp | 212661 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779495 |
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| Product | cysQ protein |
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| Protein accession | YP_926065 |
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| Protein GI | 119773325 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
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| TIGRFAM ID | [TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.39498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCCAG AACAATTGGT CGACGAGGCA ATTGCCATTG CGACCCAGGC AGGAAACAAG
ATCCGGGAAA TTTATCTGGC CGGTGATTTC GAACGGATCG TGAAATCCGA TAATACCCCT
GTCACTTCTG CCGATCTTGC CGCGAATCAA ATCATTATGG ATGGGCTGAG GCAACTGACG
CCCCATATCC CCATTTTATC GGAAGAAGCC GCCGATATTC CCCTGTGTGA GCGCGTCGAC
TGGCCTTGTT ATTGGCTTGT GGATCCCCTC GATGGTACAG GCGAATTTAT TGCAGGCAGT
GGTGATTTTT CAGTCATTAT CGCGCTGGTT GAGCATAACC GCCCCGTTAT GGGGGTGGTG
TACGTGCCCA TGACCGGAGT GTGTTATTAC GCCGTGGCGG GCCTCGGTGC ATACAAACGC
AGTGGTGGTA TGGAGGTCAG GATCACCAGT CGCCAGCTGC CCTCCGGTGT TGAACCCTCG
CTGAGACTGG CCGTGAGCCG CCGTCAGGAC CCCCAATCTG TATTGAAGCT ATTTCATCAG
CCCCGCCATT GTGAGTTGGT GGTGATGGGG GGCGCTGCGC TGAAAAGCTG TTTGGTGGCC
GAAGGCCGTG CCGATTGTTA TGTTCGGGTA GGTCCCACGG GAGAGTGGGA CACAGGGGCT
GCGCAGATCA TCATCGAAGA GGCCGGAGGC CAATTGATGG ACATAGAACT GCAACCCCTC
AGTTATAACG AACGTGACAC CTTTGAAAAT CCCAATTTTG TGGTGGTAGG TTCGCCTAAT
CTCGATTGGG ATAAAATTCT TGTTGGTGAA TAA
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| Protein sequence | MKPEQLVDEA IAIATQAGNK IREIYLAGDF ERIVKSDNTP VTSADLAANQ IIMDGLRQLT
PHIPILSEEA ADIPLCERVD WPCYWLVDPL DGTGEFIAGS GDFSVIIALV EHNRPVMGVV
YVPMTGVCYY AVAGLGAYKR SGGMEVRITS RQLPSGVEPS LRLAVSRRQD PQSVLKLFHQ
PRHCELVVMG GAALKSCLVA EGRADCYVRV GPTGEWDTGA AQIIIEEAGG QLMDIELQPL
SYNERDTFEN PNFVVVGSPN LDWDKILVGE
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