| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0161 |
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| Symbol | |
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| ID | 4602418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 190244 |
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| End bp | 192076 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639779473 |
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| Product | carboxypeptidase |
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| Protein accession | YP_926043 |
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| Protein GI | 119773303 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2866] Predicted carboxypeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTCT TCCCCATAAA ATCGTCCCTC ACCTTACTTT CTTTTGCCTT GCTGAGCGCT
GCGCCCGCTT GGTCTGCCCC CGTTGTTGCC AATCAATTCG TTAACGATGC CGTGTTGCCC
CCGATTGAAA CCTGGCAAGG TGCCAGTGAA GCCCTGATGC TGGCGCGCGA CAGTAAATGG
GCGACTCCTT TTGAGCAGAG TGGCGGCCTC AAGAGTCCCG ACTACGAAGC CACCATGGCC
TGGCTCGACA AGTTGGTTAA ACGCAGCAAA TATCTGTCAA AGGTGAGTCT GGGCAAGAGC
CCTCAGGGGC GTGACATCTG GATGATTGTT GCCAGCAAAG AGGGGGCTGA TACCCCGGGC
AAGCTGGAAA AACAAGGCAA GCCCAGTGTG CTGGTGCAGG CTGGCATCCA TTCCGGTGAA
ATCGACGGTA AAGACGCGGG CATGATGCTG CTGCGGGATA TCGAAATGGG GGGCAAGAGT
GCCCTGCTGG ACAAGGTAAA TCTGTTGTTT GTGCCCATCT TCAGTGTGGA TGCCCACGAG
CGCGCCAGCG AATATAACCG GGTAAACCAG CGCGGCCCCG TCACCATGGG ATGGCGCACC
AATGCGCGCA ACCTTAACCT CAACCGTGAC TACGCCAAGG CCGATACCAA AGAGATGCAG
TTGATGCTGA CCGCCATCAA CGACTGGAAC CCCAGCCTCT ATATCGATGT GCACGTCACC
GATGGCATAG ACTACCAGTA CGATGTGACC TTCGGTTACA ACCTGAGCCA GGGATTGAGT
CCGGCCGCGT TTGCCTGGCT CGACGGTGAA TATCGCCCGG ACATAGAATC GGCGTTGACC
CGCGCAGGTC ATATTCCCGG TCCTCTGGTG TTTGCCCTGG ATAACAGCGA TATGACCAGG
GGCATGTCGC TGTGGAGTGC ATCGCCCCGC TACTCCAATG GCTATGGTGA TGCCCGCCAC
CTGCCGACCA TATTGATAGA AAACCACAGC CTCAAGCCCT TCAAACAGAG GGTACTGGGC
ACGTACGTGA TGCTGGAACA AACCCTGAAG ACGGTGGGCG AGCAGGCAAC CGCGCTCAAG
GCCGCCATCA TGGCCGACAG CTTTGCCTTC CCTGAGCAAG TCACCCTGAC CTGGAAAGAA
GCACTTCAGC CAAAGGGGTG GGACTTCAAA GGCATAGGTT ATCGGGTGGA AAAAAGCCCC
ATTTCCGGTG CCGATGTGGT GCGCTGGACG GGCGAGCCCG TGCTGTACGA ACAGCTGCCG
GTTATCGGCA ATACAGTGCC CGATATCAGC GTCAGCCGCC CCGAGGCCTA TTATGTGTTG
CCCCAATGGC AGGAAGTCAT AGCCAAGCTG GAAACCCACG GTATCCGCTA TGAGCGACTG
CAGCAACCAC AGCAACTGAC ACTGGGTCAG TACAGTTTCA GCAACCCCCA ATTTGGCGCC
AAAGACTATG AAGGCCGCCA GCGGGTCAGT GCCGACGTCA GCCTGAACAA GGTTGAAACC
ACATTACCTG TTGGCACCAT CAAAATCAGC ACAGAGCAGG CACTGGGCGA CCTTGCCATT
TTGCTGCTGG AACCCCAGTC CCCGGACTCA TTGCTGCAAT GGGGCCTGTT CAATCCCATC
TTCACCCGCA CCGAATACAT GGAGCAGTAT GCGGTAGAAC CCATGGCGGC GCGGATGTTG
GCCGAAGATC CTGAGCTGAA AAAGGCTTTT GACGATGCTC TCAAGGATCC GGACTTTGCC
GCCGATCCAA ACGCCCGCCT GCGTTGGTTC TACGAAAAGA GCCATTATTA CGACCAGGAA
TACCTCAAGT ACCCTGTTTA TCGCAGCTTC TGA
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| Protein sequence | MPFFPIKSSL TLLSFALLSA APAWSAPVVA NQFVNDAVLP PIETWQGASE ALMLARDSKW
ATPFEQSGGL KSPDYEATMA WLDKLVKRSK YLSKVSLGKS PQGRDIWMIV ASKEGADTPG
KLEKQGKPSV LVQAGIHSGE IDGKDAGMML LRDIEMGGKS ALLDKVNLLF VPIFSVDAHE
RASEYNRVNQ RGPVTMGWRT NARNLNLNRD YAKADTKEMQ LMLTAINDWN PSLYIDVHVT
DGIDYQYDVT FGYNLSQGLS PAAFAWLDGE YRPDIESALT RAGHIPGPLV FALDNSDMTR
GMSLWSASPR YSNGYGDARH LPTILIENHS LKPFKQRVLG TYVMLEQTLK TVGEQATALK
AAIMADSFAF PEQVTLTWKE ALQPKGWDFK GIGYRVEKSP ISGADVVRWT GEPVLYEQLP
VIGNTVPDIS VSRPEAYYVL PQWQEVIAKL ETHGIRYERL QQPQQLTLGQ YSFSNPQFGA
KDYEGRQRVS ADVSLNKVET TLPVGTIKIS TEQALGDLAI LLLEPQSPDS LLQWGLFNPI
FTRTEYMEQY AVEPMAARML AEDPELKKAF DDALKDPDFA ADPNARLRWF YEKSHYYDQE
YLKYPVYRSF
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