Gene Sama_0145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0145 
Symbol 
ID4602402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp167944 
End bp168264 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content60% 
IMG OID639779457 
Productendonuclease 
Protein accessionYP_926027 
Protein GI119773287 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCCTA TCTGGCAGCT TTATATTATC CGCTGCGCCA CTGGCGAGCT GTACACCGGC 
GTGACAACCA ACGTGGCTCG CCGTTTCGAT GAGCATCAGT GCGGCGGTGC CAGGGCCGCC
AAATATTTGC GTGGTCGTGG CCCGCTTACT CTGGTGTATC AGGAGAATGT CGGCAGCCGT
GGCGATGCGC TGCGCCGAGA GCTGGCGGTC AAGAAGCTTT CAAAGGCCGC CAAGGAAGCC
CTCATCAGCC CAGTGGCTCC GGGGAACCCG GCGCCGGGAA AGTTATCTAA TCCGAAAAAG
GCGGTTGAGG TTTTTGGGTG A
 
Protein sequence
MSPIWQLYII RCATGELYTG VTTNVARRFD EHQCGGARAA KYLRGRGPLT LVYQENVGSR 
GDALRRELAV KKLSKAAKEA LISPVAPGNP APGKLSNPKK AVEVFG