Gene Sama_0138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0138 
Symbol 
ID4602395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp154760 
End bp156001 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content59% 
IMG OID639779450 
Productmolybdopterin biosynthesis MoeA protein 
Protein accessionYP_926020 
Protein GI119773280 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0303] Molybdopterin biosynthesis enzyme 
TIGRFAM ID[TIGR00177] molybdenum cofactor synthesis domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGCC AAGACCCATG CAGCAAACCC GAACTCATGC ATCCGGATGA GGCCATCAAG 
AAACTGCTCG AGCAGGTGAA ACCCATTTCA GATACCGAAA TGGTTACACT GAACCACGCC
CTGGGACGGG TATTGGCCGA AGACTTGAAC AGTCAGCTGG ACTTGCCCCC ATTCGATAAT
TCCGCCATGG ACGGATACGC CTTCCGCTTT GCCGATCTCG AGGCATTCAA TGGCGTGCTG
ACCCTCAAAG GCCAGTCCTT CGCAGGCCAT CCCTTTAAGG GCCAACTGGC CGCCGGGGAT
TGTGTTCGCA TTATGACCGG GGCGCCGATT CCCGCCGGTC TGGACACTGT GCAGATGCAG
GAGGCAACCC GGGCCGAAGG TGAGCACATC CATATCACGG CCCCCAAGGC CGCCGGTGAG
CATGTGCGCC GCCGCGGCGA AGAACTTAAG GCGGGTGATA CCGTGCTTTG CACTGGTGTA
CGCATTCGTG CCGCCGAGCT TGGCGTGCTG GCCACCGTTG GCATCAGCCA GATCAGGGTA
TTTCGTACCC TCAAGGTCGC CTTTTTCTCA ACGGGCGACG AACTCAGGCC CGTCGGCAGT
GAGCTGGCAC CGGGACAAAT CTATGATTCG AACAGATATT CCATTCGTGG GTTGCTGGAA
AAGTCCGGCT TTGAGTGGCT GGATCTCGGT GTGATCCCCG ATAGCCCCGA CGCCATTCGT
CAGGCATTTC GCGAGGCGGC AAGCCGCGCC GACGTTGTGC TGACCTCTGG TGGCGTGTCT
GTGGGGGAGG CCGACTTCAC CAAACAGATT CTGAGCGAAG AAGGGCAAAT CACCTTCTGG
AAACTCGCCA TCAAACCCGG AAAACCCTTC GCCTGTGGTC GCATCGGCCA GGCACTGTTT
TGCGGTTTGC CCGGCAACCC AGTGTCCTCC ATGGTGACCT TCCAGAAACT GGTGTGGCCT
ATGCTGCGCA AGATGCAGGG CATGCCCCAG CGTCCTGCGC TGTTAGTGGA GGCCACACTG
GCGAGCGCCA TTCGCCGCCA ACCCGGTCGG GTGGAATATC AGCGTGGCAT ACTGACACGG
GAAGACAAGG GCCTCATGGT GCGCACCACA GGTGGCCAGG GGTCAGGTAT GCTGACCTCC
ATGAGCCTCG CCAACTGCTT TATCCATCTG CCTCAATTTC AGGGCAGCCT GGAAGCGGGC
GAGACTATTC TGGTTGAACC CTTCGATAGC ATTTTGGACT AA
 
Protein sequence
MPSQDPCSKP ELMHPDEAIK KLLEQVKPIS DTEMVTLNHA LGRVLAEDLN SQLDLPPFDN 
SAMDGYAFRF ADLEAFNGVL TLKGQSFAGH PFKGQLAAGD CVRIMTGAPI PAGLDTVQMQ
EATRAEGEHI HITAPKAAGE HVRRRGEELK AGDTVLCTGV RIRAAELGVL ATVGISQIRV
FRTLKVAFFS TGDELRPVGS ELAPGQIYDS NRYSIRGLLE KSGFEWLDLG VIPDSPDAIR
QAFREAASRA DVVLTSGGVS VGEADFTKQI LSEEGQITFW KLAIKPGKPF ACGRIGQALF
CGLPGNPVSS MVTFQKLVWP MLRKMQGMPQ RPALLVEATL ASAIRRQPGR VEYQRGILTR
EDKGLMVRTT GGQGSGMLTS MSLANCFIHL PQFQGSLEAG ETILVEPFDS ILD