Gene Sama_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0103 
Symbol 
ID4602360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp116150 
End bp117250 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content56% 
IMG OID639779415 
Producthypothetical protein 
Protein accessionYP_925985 
Protein GI119773245 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000146304 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACTCAAT CAATGGCCCC AAACTCCGTG GTCACGCAAT CTATGGCTCC AAAATTTTTG 
TTTATCCCCG TCTCTTCTGC TGAAGGCATG GGGGAGTACA TGCGCTCGCT GATAGTGGCA
GATGAAGTGA AGCGCTGCTG GCCAGCTGCC GAGGTGTGTT TCATTCTCAG CAAGGAAGCA
CCTTACGCAG CCAGCTGCCC ATATCCAGCC AAACTGCTGG ACCGCACACC CACCAAAGAA
GTGAAGGCCG TGAATGACAT CATGGAGACA TTTCGCCCCG ATGTGGTGCT CTTTGATGCG
TCCGGCCGCA AGTCTCAGCT GGCACGGGCC CATGCCCTGG GCGCCAAAGT TGTGTTTTTC
AGCCAGCACA GGCGCAAGCG CAGCCGTGGT ATGAAAATAG GCCGTGCCCG GGTGACGGAT
GCCCATCTGG TCGTACAGCC GGAATTTGTG ATTGGTCCCG TTTCCGCTTT CGATGCTTTT
AAGTTGAAAT TGATTGGTAA GCCGCTGCCT GAGTGTATTG GGCCTGTGTT CAGCGCGCCG
GATAAGGCAA GACAGCAGCA ACTGCTCGCC CAATATGGTC TGGTCGACGG GGAGTTTGTG
CTCTTTAACG CCGGCTCAGG TGGGCATAAG TTGGCCGGAG GCCTCGCAGC AGACCGTTTT
TTTGAGGCAG CACAAGCCAG CTATGTCGCC AGTGGGCTCA AATCCGTCAT GGTGTTTGGT
CCCAATTATC CCAAGGCATT ACCCGAGGCA TCGGGAGTGA TTTGTCTGAG CGCCCTGGCC
AATAGTGACT TTATTAACTT GCTGGTGGCT GCCAAAGCGG CGGTGCTGAG CGGTGGTGAT
ACCTTGCTGC AGGCTATCGC CTTGAAAAAG CTGGTACTGA CGGCTCCGGT TTCCAAAGAC
CAGCCGCCGC GTATCGCTGT TTGTGCCGAC AGAGGGCTGG TGCTGGCCTG TGAGCCAGAG
CAGCTTGCCG CCAACATTCC TGCTCTGTTT TCCGATGAAA CCACAGGGCC ACTGCAGCAG
GCACTGGCAG CCGAAGCCGA TATGGACGGC CTGCAACTGA CCATGAATAA AATTAAGCAT
TTGCTGGAGG TTCAGCCATG A
 
Protein sequence
MTQSMAPNSV VTQSMAPKFL FIPVSSAEGM GEYMRSLIVA DEVKRCWPAA EVCFILSKEA 
PYAASCPYPA KLLDRTPTKE VKAVNDIMET FRPDVVLFDA SGRKSQLARA HALGAKVVFF
SQHRRKRSRG MKIGRARVTD AHLVVQPEFV IGPVSAFDAF KLKLIGKPLP ECIGPVFSAP
DKARQQQLLA QYGLVDGEFV LFNAGSGGHK LAGGLAADRF FEAAQASYVA SGLKSVMVFG
PNYPKALPEA SGVICLSALA NSDFINLLVA AKAAVLSGGD TLLQAIALKK LVLTAPVSKD
QPPRIAVCAD RGLVLACEPE QLAANIPALF SDETTGPLQQ ALAAEADMDG LQLTMNKIKH
LLEVQP