| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0102 |
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| Symbol | |
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| ID | 4602359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 115093 |
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| End bp | 116145 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639779414 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_925984 |
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| Protein GI | 119773244 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000136303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACATTTG ATCCCAGCCT GATGAAATCC CTGTGTTTGC TCCGCCTCTC TGCCATCGGC
GATGTGTGCC ATGCCGTGGC CATGGTGCAG GCGATTCAAC GCCGTTATCC CGACCTTGCC
GTCACCTGGG TGATAGGCAA AGTGGAATAT CAACTGCTTA AACATTTACC GGGCATCGAG
TTTGTGATTT TCGATAAGTC GCAGGGTTTC AAGGCCTATG GCCAGCTGTG TCGTGCTCTC
AAAGGGCGAC ATTTCGATGT TCTGCTGCAT ATGCAGGTGG CGCTCAGGGC CACCATAGCC
TCCTTGATGA TCCCGGCCAA AGTGCGTATT GGTTTTGACC GTGCCCGCGC CAAAGAAGGG
CAGTGGCTGG TGACCAACGA GCGGGTCGAG GCCATGGCGA CTCCCCATGT GTTGGAAGGC
TTTATGGGCT TTGCCAGGAA ACTGGGCGTG ACCGAGCTGC CTCCCTCATG GGACATGCAT
ATTCCTGCCG CAGACGAAGT GTTCGCGAAA GAGTTGGTTG CTGATGGCGA AAAGGTTCTG
GCCATTTGCG CCGCCGCGAG TAAGGCTGAG CGCAACTGGC TGCCCGAGCG TTACGCCGCC
GTGGCTGATT ATGCTGTTTC CAAAGGATAC AGGGTGCTGC TTTGCGGCGG CCCAGCACAG
CTTGAAAAAG ATCTGGCTGC GGCAATTGAG GCCAATTGTT CGTCTAAGCT AACCAATCTT
GTTGGAAAAA CCTCTTTGAT TCAGCTTTTG GCGCTATTAA AGCGAGTTTC ACTGGTGATT
GCACCGGATA CCGGTCCTGC CCACATGGCG GTGACTCAGG GCACGCCCGT GATTGGTCTC
TACGCACACT CTAACCCAGG CCGAACCGGA CCTTATTTCA GCCGCGAGCT GACAGTCAGT
GTCTATGACC AGGTGATTGC CGAGCAGTAT CCCAATCAGC AAATTCCCTG GGGTACCCGG
GCCAAGGGCG ACACTCTGAT GGAAAAAATT GAAGTTGCTG ACGTTTGTCG CATGTTCGAC
AGGGCCACGG ACGTCGCCAC CCAGGAGGTG TAA
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| Protein sequence | MTFDPSLMKS LCLLRLSAIG DVCHAVAMVQ AIQRRYPDLA VTWVIGKVEY QLLKHLPGIE
FVIFDKSQGF KAYGQLCRAL KGRHFDVLLH MQVALRATIA SLMIPAKVRI GFDRARAKEG
QWLVTNERVE AMATPHVLEG FMGFARKLGV TELPPSWDMH IPAADEVFAK ELVADGEKVL
AICAAASKAE RNWLPERYAA VADYAVSKGY RVLLCGGPAQ LEKDLAAAIE ANCSSKLTNL
VGKTSLIQLL ALLKRVSLVI APDTGPAHMA VTQGTPVIGL YAHSNPGRTG PYFSRELTVS
VYDQVIAEQY PNQQIPWGTR AKGDTLMEKI EVADVCRMFD RATDVATQEV
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