| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0100 |
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| Symbol | |
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| ID | 4602357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 113051 |
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| End bp | 114313 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639779412 |
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| Product | 3-deoxy-D-manno-octulosonic-acid (KDO) transferase |
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| Protein accession | YP_925982 |
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| Protein GI | 119773242 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.014553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000201805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGCTCGAT TGCTCTATTC AGTTCTCTTA TACCTGCTGT CGCCACTCTT GGTACTTTAT
CTGGCCCAGC GTGCCATAAA GAGCCCGGAT TATCGTGGTC GCTGGGGCGA GCGGTTTGGC
CTTAAGGCGC TGATGCCTAC CGACATACTG ATCCATTCTG TCTCCATGGG CGAGACGCTC
GCAGCCATAC CACTCATTCG CGCTATCATG GCGGCCAGGC CAAATCTGCG GATCACGGTT
ACCACGTCAA GCCCCACGGG CTCGGCAGAA GTTATCAAGG CCTTTGGCGA CCGGGTACAA
CATTGTTATT TACCCTTTGA CCTGGGGTTT GCCGTTAACC GCTTTTTGAG CCAATTGGGC
TGCGCCGAGC TTATCATCAT GGAAACCGAG CTGTGGCCAA ACCTCATTGC CGGGGCCAGG
GCTCGGGGCA TCAAGGTATC TTTGCTCAAT GCCCGTTTGT CAGAAAAATC CGCCGCCAGT
TATCAAAAGT TCGCATCCCT CACTGTGCCC ATGCTCAGGT CGCTGGACCA GATTGCGGTG
CAAACGACCA AAGAAGCAGA ACGTTTTGTC GCACTTGGCG TGGATGCCTC GCGGGTACAT
GTGTGTGGTA GTTTGAAGTT TGATATCCAG ATCCCCCCAT CCCGCCGTGA ATCGGCGCGG
CAGTTGCGGC AGAGTTGGGG ACGGGACGAC CACTTGATAT GGGTGGCGGG CAGCGTACAT
CCCGGTGAAT TCGATACCAT GCTCAGCGCC CATCACCAAC TACTTGAGCA GTTTCCAGAC
GCGCTGCTGA TTATGGTGCC AAGGCATCCT GAGCAGTTTG CCAACGCTGC ACGGGCCATA
CGTGAGAGAG GCTTACAGCT GGCCGTTCGC AGTATGGGAG AGGCGCCGAC AGTGGGCACG
CAGGTGCTCC TTGGCGACAC CATGGGCGAG CTCTTGACCT GGTACGGCGC TGCCGATCTG
GCCTTTGTGG GCGGTACACT GGTGGTCAAT GGCGGCCACA ATCCGCTGGA GCCTGCGGCC
ATGGGGTTAC CGGTTGCCAT GGGACCCAAC CATTGGGATT TTAAAGAAAT TACCGAACTT
CTGCAGCAGG CGGGTAATCT CACCCTGTGT GCTACCCCGG ACGCCTTTAA CGACTGGTTG
TTGGCGACTG CACAGGATTC GGTTGGCCGC CTGACCGCCG GTGAGGCTGG GTTAAGAGTC
GTGGAGAGCA ATCGTGGGGC GCTGAGTCGT CAACTGGCGG TATTGGGTTA CGCAGCAGCG
TAA
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| Protein sequence | MARLLYSVLL YLLSPLLVLY LAQRAIKSPD YRGRWGERFG LKALMPTDIL IHSVSMGETL
AAIPLIRAIM AARPNLRITV TTSSPTGSAE VIKAFGDRVQ HCYLPFDLGF AVNRFLSQLG
CAELIIMETE LWPNLIAGAR ARGIKVSLLN ARLSEKSAAS YQKFASLTVP MLRSLDQIAV
QTTKEAERFV ALGVDASRVH VCGSLKFDIQ IPPSRRESAR QLRQSWGRDD HLIWVAGSVH
PGEFDTMLSA HHQLLEQFPD ALLIMVPRHP EQFANAARAI RERGLQLAVR SMGEAPTVGT
QVLLGDTMGE LLTWYGAADL AFVGGTLVVN GGHNPLEPAA MGLPVAMGPN HWDFKEITEL
LQQAGNLTLC ATPDAFNDWL LATAQDSVGR LTAGEAGLRV VESNRGALSR QLAVLGYAAA
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