| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0098 |
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| Symbol | |
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| ID | 4602355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 110838 |
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| End bp | 112031 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639779410 |
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| Product | 2-amino-3-ketobutyrate coenzyme A ligase |
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| Protein accession | YP_925980 |
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| Protein GI | 119773240 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
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| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.189992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000233483 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCATCAA CCTCATTCTA CGAGCAGATC AAACAACAAC TCGCCGACGT TAAGGCCGAA
GGCCTCTACA AAAGCGAACG CGTGATCGTC TCACCGCAAC AGGCTGCAAT TAAGGTGGGC
GGCGATGAAG TCATTAACTT CTGCGCCAAC AACTATTTGG GCCTGGCCAA CCATCCTGAG
CTGGTCAAAG CCGCTCAAGC AGGTTTGGCC GACCACGGCT TTGGTATGGC CTCAGTGCGC
TTTATCTGCG GCACCCAGGA CATCCACAAA CAGCTGGAAG CGAAACTGTC TGAATTCCTC
GGCACCGAAG ATACCATCCT GTATTCCTCT TGCTTCGATG CCAATGCCGG CCTGTTCGAA
ACCCTGCTCG GCCCCGAAGA TGCCATCGTC TCCGATGCAC TGAACCACGC TTCTATCATC
GACGGTGTGC GCCTGTGTAA AGCCATGCGA TTCCGTTATG CCAACAATGA TATGGCCGAT
CTGGAAACCC AGCTTAAAGC AGCCCGCGAG GCCGGTGCCC GTCATATCCT GATTGCCACC
GATGGTGTGT TCTCCATGGA TGGCGTAATT GCCAACCTAA AAGGTGTGTG TGACCTTGCC
GACCAATACG GCGCCCTGGT GATGGTAGAC GACTCCCACG CGGTGGGCTT TATCGGCCAA
AATGGTCGTG GTACTCACGA GTACTGTGAC GTGATGGACC GGGTAGACAT CATCACAGGT
ACACTGGGCA AGGCTCTGGG CGGCGCCTCG GGTGGTTACA CCTCGGGTAA AAAAGAAGTG
ATCGACTGGC TGCGTCAACG CTCACGCCCT TATCTGTTCT CCAACTCACT GGCCCCGTCC
ATTGTGGCCG CCTCTATCCG CGTGCTCGAC ATGCTCAAAG ATGGCCAGGC ACTGCGTGAA
GCCGTATGGG AAAACAGCCG TTATTTCCGT GAAAAAATGT CTGCTGCCGG TTTCACCCTG
GCCGGTGCCG ACCATGCCAT CGTTCCGGTT ATGCTGGGCG ATGCCAAGCT GGCTGCCGAT
TTCTCGGCCC GCCTGCTGAA AGAAGATATT TACGTGATTG GTTTCTCCTT CCCTGTGGTG
CCAAAGGGCC AGGCCCGTAT CCGCACCCAG ATGTCTGCCG CCCACACCCG TGCGCAGCTG
GACAAGGCCA TTGAAGCCTT CACCCGTATT GGTAAGGAAA TGGGCATCAT CTGA
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| Protein sequence | MASTSFYEQI KQQLADVKAE GLYKSERVIV SPQQAAIKVG GDEVINFCAN NYLGLANHPE
LVKAAQAGLA DHGFGMASVR FICGTQDIHK QLEAKLSEFL GTEDTILYSS CFDANAGLFE
TLLGPEDAIV SDALNHASII DGVRLCKAMR FRYANNDMAD LETQLKAARE AGARHILIAT
DGVFSMDGVI ANLKGVCDLA DQYGALVMVD DSHAVGFIGQ NGRGTHEYCD VMDRVDIITG
TLGKALGGAS GGYTSGKKEV IDWLRQRSRP YLFSNSLAPS IVAASIRVLD MLKDGQALRE
AVWENSRYFR EKMSAAGFTL AGADHAIVPV MLGDAKLAAD FSARLLKEDI YVIGFSFPVV
PKGQARIRTQ MSAAHTRAQL DKAIEAFTRI GKEMGII
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