| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0095 |
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| Symbol | |
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| ID | 4602352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 108523 |
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| End bp | 109353 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779407 |
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| Product | glpG protein |
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| Protein accession | YP_925977 |
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| Protein GI | 119773237 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000920194 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0164253 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTCG GCCGACTGCC CAACGCCAGA GCAGCTCAGG CCCTGGCGGA TTATCTCAAA
AGCCGGGGGA TAGAATGCCT AATCAGCCCG GTAGCAGAGG GCGTGAGCCT GTCGGTGGTC
AAGCCACAGG ATCTGGCTGC TGCCAAGGCC GAATTCGATT ACTTTCTGCG TCATCCGGGT
GATGATAAAT ACCTGGCGGC ATCATGGGAA ACCGGCAATA CAGAAACTCA ATTTAACTAT
GGTTCACCGG GACTTGCGCT GCTGAGCCGC TTTGTGACTG CCGCCGGACC CATTACGCTC
ACTGTATTCG CATTCTGTAT TCTGGTGTAT ACGGCTTTTA ATCTGGGCTT TGCCGAACAG
ACATATTCAC TGCTGAGTTT TTTTGGCGCC CACGGCACCG ACCAAAGCTC CGAAGTGTGG
CGAATCTTCA CCCCGACGCT GATGCATTTT TCGCTGATGC ATATCAGCTT TAATCTCTTG
TGGTGGTGGT ATCTGGGCGG AAAGATTGAA ACCCGTATCG GCTCCTGGCC GCTGATGACA
TTGCTGCTTG TGGCAGGCAC CCTGCCCAAC CTCATTCAGT ATTATGTTTC GGGCCCTAAC
TTTGGCGGTT TGTCCGGTGT TGTGTATGCC GTCGCAGGCT ACACCTTTGT GATGGGTATC
AGAAAGCCCT CTGCCGGTAT CTATCTGCCA CCAAGCTATA TGGGCTTTAT GCTGGTTTGG
CTGATATTGG GCTTCTTTGA TGTTCTCGGA CTTTCCATGG CCAATGGCGC CCACCTGGGT
GGACTCGCAG TGGGTCTGCT GCAGGGGTTA TGGGACAGTC GCCGCCGCTA A
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| Protein sequence | MEFGRLPNAR AAQALADYLK SRGIECLISP VAEGVSLSVV KPQDLAAAKA EFDYFLRHPG
DDKYLAASWE TGNTETQFNY GSPGLALLSR FVTAAGPITL TVFAFCILVY TAFNLGFAEQ
TYSLLSFFGA HGTDQSSEVW RIFTPTLMHF SLMHISFNLL WWWYLGGKIE TRIGSWPLMT
LLLVAGTLPN LIQYYVSGPN FGGLSGVVYA VAGYTFVMGI RKPSAGIYLP PSYMGFMLVW
LILGFFDVLG LSMANGAHLG GLAVGLLQGL WDSRRR
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