Gene Sama_0091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0091 
Symbol 
ID4602348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp102313 
End bp102933 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content54% 
IMG OID639779403 
Productcytochrome c, class I 
Protein accessionYP_925973 
Protein GI119773233 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.45105e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.1806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT TAGCTCTTGC GCTGTCTGTT TTCGCTGCTA TGTCTACCAA TGCTATGGCT 
GAAGGTGATG CGGCGGCGGG TCAATCCAAA GCGGCTCTGT GCGTTGCCTG TCACGGCGCC
GATGGCAACA GCATGATCGA TATGTACCCC AAGCTGGCCG GTCAACACGC TAAGTACCTG
GAAAAGCAAC TGCACGAATT CCAAAGTGCC ATGAAGACCG GCGGCAAAGA AGGCCGTATG
GATCCTATCA TGGGCGGGAT GGTAATGACC CTGAACGAAC AGGATATGGC TGATTTGGCT
GCCTTCTTTG CCAGTCAGAC CCAAACCCAC TCACCTGTTG CCGATGTACC CGCTCTGGGT
GAGCAGCTGT ACAAGGGTGG CGACATGTCC CGTGGCATCA CCGCCTGTAT CGCCTGTCAC
GGTCCAGAAG GTAAAGGTAC CGAGCAAGCC GGTTTCCCAA TGGTTTCTGG CCAGCACGCC
AACTACATCA AGATCCAGCT CACCAAGTTC CGCGACAAGG CTCGTACCAA CGACCTGAAC
GGCATGATGC AGGATGTAGC GAAAAAGCTG AGCGATGCCG ATATCGACGC ACTGTCCAAG
TACCTTGCTA ACCTGAAGTA A
 
Protein sequence
MKKLALALSV FAAMSTNAMA EGDAAAGQSK AALCVACHGA DGNSMIDMYP KLAGQHAKYL 
EKQLHEFQSA MKTGGKEGRM DPIMGGMVMT LNEQDMADLA AFFASQTQTH SPVADVPALG
EQLYKGGDMS RGITACIACH GPEGKGTEQA GFPMVSGQHA NYIKIQLTKF RDKARTNDLN
GMMQDVAKKL SDADIDALSK YLANLK