| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0083 |
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| Symbol | |
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| ID | 4602340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 92823 |
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| End bp | 93776 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639779395 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_925965 |
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| Protein GI | 119773225 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.902685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.481524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATACAC CAGCTTTGAA TACATCTTTG ACAATTCCAC CTGCCCTTAA GGCGCTGTAT
CAGCGCTGTG AGCTGGGCAG CCTCGCCACC AGCCCCGGCG TCGACATCGC CTGGCTGGCA
CTGGAACACC CCAGTCCTAA GGGCAGCATT GTTTTTTCCA ATGGCCGGGT TGAGGCCTTT
CTCAAGTATC TGGAGCTGTA CCAGGATTTT TATGACGCTG GCTACAGTGT CTACGCACTG
GACCATCGCG GTCAGGGTCT ATCGAGCCGT CTTACGCCCA ACCGCCATAT GGGCCATGTG
GCGCACTTCA GTGACTATGT CACTGACTTC AATCATTTTA TAGACCAGGT TGTGCGCCCC
CGAGCCAAAG CGCCGCTGTT TCTGGCTGGC CACTCCATGG GCGGCGCCAT AGGCACCCTG
TATTTGCAGG CGCATTCGGG CCTCTTCAGT GCCGCCTGTT TCTCGGCCCC CATGTACGGC
ATCTGCCTGC CCATGAACAA GGTGTTTGTG CGCTGGCTGG CGCAAAAGCT GGATGCCAGC
GCTAAAGGGC TACCCAACTA CATTCTCGGG GGCAAGGACT ATCATCCGGC CCCCTTTGCC
AAAAACGACC TCACCAAAAG CGAGGCCCGT TATCAGGCCT ACCGCGAGCT CTATGAGCAA
AACCCGCAAT TGCAACTGGG CTCGCCCACC AACCGCTGGC TGCTGGAAGC ATTGGATGCC
TGTGACGAAG CGGTATTGGC GGCGCGGGAG AGCAAAATCC CTTTGCTGGT GTTGCAGGCG
AGTGAAGACA CCATAGTTGA CAACAAAGCC CAGAACAGGG CCATGGGTGG ACTGTGCGAA
TGCTTGCAGA TTAACGACGC CCGCCATGAG ATTTTGATGG AATGCGACGG CCCACGCACC
AAGGCGATAG AGGCGATGCT GGGCTTTTTT GCCAGCCATG CCAAGCAGCG CTGA
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| Protein sequence | MHTPALNTSL TIPPALKALY QRCELGSLAT SPGVDIAWLA LEHPSPKGSI VFSNGRVEAF
LKYLELYQDF YDAGYSVYAL DHRGQGLSSR LTPNRHMGHV AHFSDYVTDF NHFIDQVVRP
RAKAPLFLAG HSMGGAIGTL YLQAHSGLFS AACFSAPMYG ICLPMNKVFV RWLAQKLDAS
AKGLPNYILG GKDYHPAPFA KNDLTKSEAR YQAYRELYEQ NPQLQLGSPT NRWLLEALDA
CDEAVLAARE SKIPLLVLQA SEDTIVDNKA QNRAMGGLCE CLQINDARHE ILMECDGPRT
KAIEAMLGFF ASHAKQR
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