| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0076 |
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| Symbol | |
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| ID | 4602333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 81833 |
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| End bp | 82699 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639779388 |
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| Product | transcription activator, effector binding |
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| Protein accession | YP_925958 |
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| Protein GI | 119773218 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins
[COG3449] DNA gyrase inhibitor |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGACTG GACTGGACCC AAGACTTGCA AGGGTGTGTG ACTACATCAG CCGCCATCTG
GATGAAGAAC TCAGCCTCGA GCGTTTGAGC CGGGTGGGAC ACTTGTCGCG ATTTCACTTT
CATCGGCTGT TTGCAGCCGG GCTTGGCATT CCGCTGGGGC GCTTTGTGCA GCTGCAACGG
CTGAAACGGG CGTCGTTCCG CCTTGGGTTC GAGCATTCAT TGCGGGTGCT CGATATCGCG
TTGGAGGCCG GGTTCGATAG CGCCGAGGCC TTCAGCCGCG CTTTTAAGCG TGAGCTTGGT
CTCAGCCCTT CGGCATTTCG ACAAACACCT GACTGGGTGC TGTTGCACTC GGTGATGGAG
CTTATCAAGG TGCCCCAGCG AGGGTTAACA GGAGCCAACA TGGACATAAA ATTGATTGAG
ATGCCGAGCC TGTCAGTGGC CTGGCTGGAA CATCAGGGTA ATCCGGCGCG GGTGCTGGAT
ACCAGTGCCC GTTTTATCGA ATGGCGCAAG CAAACCGGGC TGTCACCTAT AGCCAGCTCG
CGCACCTTTG GCATTCCCAA TGGCGACCCG GCCACCATGC CGGCCCAGGA TTTTCGCTTT
AAGGTAGCGG GCAGTATTAA TGTGCCCGTA CCGGCAAATC CACAGGGCGT GGAAAATGGT
GAAATCGCTG GTGGCCGCTA CGCCGTTATC CGTCATCTTG GCAGCCAGGC GAATATGGAT
ACCAGCATCT ACAGCTTTTT CCGCGACTGG CTGCCCCACA GCGGTGAAAA CGTACGGGAA
GCGCCACTGT TTTTCGAATA CCTGAACTTT GTGCACCAGG TAGACGAGTG CGACCTTATC
ACAGACATTT ATGTGCCACT GAACTAA
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| Protein sequence | MPTGLDPRLA RVCDYISRHL DEELSLERLS RVGHLSRFHF HRLFAAGLGI PLGRFVQLQR
LKRASFRLGF EHSLRVLDIA LEAGFDSAEA FSRAFKRELG LSPSAFRQTP DWVLLHSVME
LIKVPQRGLT GANMDIKLIE MPSLSVAWLE HQGNPARVLD TSARFIEWRK QTGLSPIASS
RTFGIPNGDP ATMPAQDFRF KVAGSINVPV PANPQGVENG EIAGGRYAVI RHLGSQANMD
TSIYSFFRDW LPHSGENVRE APLFFEYLNF VHQVDECDLI TDIYVPLN
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