Gene Sama_0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0061 
Symbol 
ID4602318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp66964 
End bp67356 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content50% 
IMG OID639779373 
Productrhodanese-like protein 
Protein accessionYP_925943 
Protein GI119773203 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGCC TGGCTTGGCT GGGTCTGTTT TTGGCTGTGG TGATTACAAC CGTTAAGTCT 
ATGACTTCCA AGGTGAAGCA CATCAGCACC CAGGAGCTGG TTCAGCTGGT TAACAAACAA
AATGCCAAGG TGGTAGACGT TCGCGGTAAA GAAGAATTCC GCAAAGGTCA TATCGTCGAT
GCGATGAACA TCAGCATGTC AGAAATCAAA AATAATCAGA TTTCTGCCCT TGAAAGCGCC
AAGAAGAGCC CCATTATATT GGTATGCAAC GCTGGCATGA CGTCTGCTCA GGCGGCGCAG
TTGCTGGTTG CTCAAGGTTT TGAGCAGGTA TACAGCCTCA AAGGCGGTAT GGGTGACTGG
CAAGCGGCCA ACCTGCCGGT AAAGAAGCGC TAA
 
Protein sequence
MLSLAWLGLF LAVVITTVKS MTSKVKHIST QELVQLVNKQ NAKVVDVRGK EEFRKGHIVD 
AMNISMSEIK NNQISALESA KKSPIILVCN AGMTSAQAAQ LLVAQGFEQV YSLKGGMGDW
QAANLPVKKR