| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0050 |
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| Symbol | |
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| ID | 4602307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 52537 |
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| End bp | 53451 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639779359 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_925932 |
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| Protein GI | 119773192 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0408] Coproporphyrinogen III oxidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.646189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.257858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACTTC CCAACGCCGA AGAGGTAAAA GCGTTTTTAA TGCAGCTGCA GGCTAACATC
TGCGCTGGCC TGGAAAGGCT GGATGGTCAG GCGAGCTTTG CCACCGACAG CTGGCAGCGT
GCCGAAGGCG GCGGTGGTAT CAGTCGTGTG CTGACCGATG GCGCTGTATT TGAACAGGCC
GGGGTGAACT TCTCCCATGT GATGGGCGCC TCCATGCCCG CATCTGCCAC GGCACACAGA
CCCGAACTGG CGGGCCGCAG CTTTGAGGCG ATGGGGGTTT CTTTGGTAAT CCACCCCAAA
AACCCTTATA TCCCAACCAC CCACGCCAAC GTCCGCTTCT TTATTGCCCG TAAAGAAGGT
GCCGACCCTG TGTGGTGGTT CGGCGGTGGC TTCGATTTAA CCCCTTACTA TCCGTTCGAG
TCAGACGTTA AAGAGTGGCA CCAGAGTGCC AAGGATCTCT GTGCGCCTTT CGGTAATGAG
GTTTACCCCA AGTACAAAGA ATGGTGCGAC AAATACTTCT TCCTGCCGCA TCGCGGTGAA
ACCCGAGGTG TGGGTGGTCT GTTCTTCGAT GATCTCAATC ATTGGGAATT TGATAAGTGC
TTTGACTATA TGCAAGCGGT GGGGAATGGC TTCCTCACGG CCTATGCACC TATCGTTGAG
CGTCGTAAAG ACACGGCGTA TGGCGAGCGT GAGCGTGATT TCCAGCTTTA TCGCCGCGGC
CGCTATGTGG AATTTAACCT GGTGTATGAC CGTGGCACCT TGTTCGGCCT GCAAACCGGT
GGTCGCACTG AATCAATTCT GATGTCGATG CCACCGCTGG TGCGTTGGCA GTATGCCTAT
AGTCCTGAAG CCGGGACGCC TGAGGCTGAG CTGTACGAGC GTTTCCTCAA GCCCCAGGAC
TGGCTGGCTG ATTAA
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| Protein sequence | MGLPNAEEVK AFLMQLQANI CAGLERLDGQ ASFATDSWQR AEGGGGISRV LTDGAVFEQA
GVNFSHVMGA SMPASATAHR PELAGRSFEA MGVSLVIHPK NPYIPTTHAN VRFFIARKEG
ADPVWWFGGG FDLTPYYPFE SDVKEWHQSA KDLCAPFGNE VYPKYKEWCD KYFFLPHRGE
TRGVGGLFFD DLNHWEFDKC FDYMQAVGNG FLTAYAPIVE RRKDTAYGER ERDFQLYRRG
RYVEFNLVYD RGTLFGLQTG GRTESILMSM PPLVRWQYAY SPEAGTPEAE LYERFLKPQD
WLAD
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