| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0036 |
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| Symbol | |
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| ID | 4602293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 40332 |
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| End bp | 40865 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639779345 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_925918 |
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| Protein GI | 119773178 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG4635] Flavodoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.144256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCATA CCTTGATCCT CTATTCCACC GTGGACGGCC AGACCCGCAA AATATGTGAG
CGCATCAAGG CACGCTGTGA GGCGGCAGGC GAGCAGGTCA CAATGGCGGA TATCGCTGAG
GCAGATGCCC TGCTTGAGAC GGCGGATAAG GTATTGGTGG GGGCCAGCAT ACGTTACGGT
AAACACAGGC CTGCATTGTT TGAGTTTGCC ACCAGGTATG GCGCTGTGCT GGGCACAAAA
ATAAACGGTT TTTTTACCGT GAACGTGGTT GCGCGAAAGC CTGAGAAGAA CACCCCTGCA
ACTAACCCCT ATATGCAGAA GTTTTTGCAG CTATCCCAAT GGCAGCCACA GCAGTTAGGC
GTATTTGCCG GTAAGATTGA TTATCCCCGT TACGGCTTAT TTGACCGTAC CATGATCCGC
TTTATCATGT GGATCACCAA GGGCCCCACA GATATAAAGG GCACCTTCGA GTTTACCGAC
TGGGACAAGG TTGACGGCTT TGCCGACACT TTTGCTGCCC GCAAAGCACC TTAA
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| Protein sequence | MTHTLILYST VDGQTRKICE RIKARCEAAG EQVTMADIAE ADALLETADK VLVGASIRYG
KHRPALFEFA TRYGAVLGTK INGFFTVNVV ARKPEKNTPA TNPYMQKFLQ LSQWQPQQLG
VFAGKIDYPR YGLFDRTMIR FIMWITKGPT DIKGTFEFTD WDKVDGFADT FAARKAP
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