| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0033 |
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| Symbol | |
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| ID | 4602290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 36808 |
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| End bp | 38127 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639779342 |
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| Product | proline dipeptidase |
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| Protein accession | YP_925915 |
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| Protein GI | 119773175 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0006] Xaa-Pro aminopeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.12189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0842725 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATT TGGCCCCGCT GTACGTCAAT CACATCAATG AACAAAACCG CCGGGTGGCC
GATGTGTTGG CCCGGGAACA ACTTGAAGGC CTGGCCATTC ATTCAGGCCA ATATCACCGT
CAGTTTTTGG ATGACATCAA CTATCCCTTT AAGGCAAATC CGCATTTCAA GGCCTGGCTG
CCGGTGCTGG ATATTCCCAA CTGCTGGATA CTAACCAATG GGCGTGATAA GCCTGTGTTG
GTGTTCTATC GCCCTGTGGA TTTCTGGCAT AAGGTCAGCG ATGTGCCCGA GAGTTTCTGG
ACCGAGCATT TTGAAATTAA GCTGCTGACT AAGGCAGAGA AGGTGGCGGA TTTGCTGCCA
AAGAACCTCG ATACCTGGGC TTATATTGGT GAACATCTGG ATGTGGCCGA CGTGCTGGGC
TTCAAGAATC GCAATCCCGA TGGAGTGATG AACTACTTCC ATTGGCACAG AAGCTTCAAG
ACAGACTATG AGCTTGCCTG TATGCGTGAG GCAAACCGAG TCGCGGTGGC AGGCCATAAT
GCTGCGAGAG AAGCCTTCTA CAAGGGCGCC AGTGAGTTTG AAATACAGCA GCAATATTTG
TCGGCCATAG GTCAGGGCGA GAATGACGTG CCTTACGGCA ACATCATTGC TCTGAACCAA
AATGCGGCCA TCCTGCACTA CACCGCGCTG GAGCACGCGG CGCCTGCCAA CCGGCATTCG
TTTTTAATCG ATGCAGGCGC TTCTTTTAAT GGCTACGCCG CAGACATAAC CCGCACCTAT
GCATTTGAAA AAAATGTGTT TGATGAGCTT ATCAAGGCAA TGGACAAGAT GCAGCGGGAG
CTGGTGGACA TGATGCGTCC CGGTGTGCGC TTTACCGATC TGCATCTGGC TACACATCAC
AAATTGGCTC AGCTGCTGCT GGAGTTTGGT ATCGCCAGGG GCGAGGCCAG CGACTTGGTG
GAGCAGGGGG TGACCAGTGT GTTCTTCCCT CATGGGCTTG GGCATATGTT GGGCTTACAG
GTGCACGATG TGGCTGGGTT TGCCCATGAT GAGCGTGGCA CCCATTTGGC TGCGCCAGAG
CGTCATCCCT TCCTGCGCTG TACCCGAGTT CTTGCGCCAC GCCATGTGCT GACCATAGAG
CCTGGTTTTT ACATCATCGA CAGTCTGTTG ACCGAACTGA AGGCCGATGG CCGGGCTGAA
GCAGTGAACT GGGACATGGT AAATACACTG CGTCCCTTTG GCGGCATACG TATTGAGGAT
AACGTGATTG TGCATCAGGA GCGCAACGAG AATATGACCC GGGATCTGGG GCTTAACTGA
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| Protein sequence | MENLAPLYVN HINEQNRRVA DVLAREQLEG LAIHSGQYHR QFLDDINYPF KANPHFKAWL
PVLDIPNCWI LTNGRDKPVL VFYRPVDFWH KVSDVPESFW TEHFEIKLLT KAEKVADLLP
KNLDTWAYIG EHLDVADVLG FKNRNPDGVM NYFHWHRSFK TDYELACMRE ANRVAVAGHN
AAREAFYKGA SEFEIQQQYL SAIGQGENDV PYGNIIALNQ NAAILHYTAL EHAAPANRHS
FLIDAGASFN GYAADITRTY AFEKNVFDEL IKAMDKMQRE LVDMMRPGVR FTDLHLATHH
KLAQLLLEFG IARGEASDLV EQGVTSVFFP HGLGHMLGLQ VHDVAGFAHD ERGTHLAAPE
RHPFLRCTRV LAPRHVLTIE PGFYIIDSLL TELKADGRAE AVNWDMVNTL RPFGGIRIED
NVIVHQERNE NMTRDLGLN
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