| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0024 |
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| Symbol | |
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| ID | 4602281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 22337 |
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| End bp | 23392 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639779333 |
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| Product | putative signal transduction protein |
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| Protein accession | YP_925906 |
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| Protein GI | 119773166 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00341076 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGGCTTT TCAGCAAGCT TTTCAATATT CGTGATAACA CTGTGGTGGA GCGTCCCCGT
AGCCTTACCG GGGAAGGTAT TGCTGCTAAG ACGCAAACCA GGGTCGCCGA GAAGATATCT
TCAACCCCAA ACGATACCGA TACGGTTGCC GCACCTACCG TCGATGTGGC GGCACTCTTT
TACAGCCTGC TGTTTGCAAC CAGTCATAAA GATACAGGTG GCATTGCCAA TAACCTTGAA
AAGCGATTGA TTGGCAATGT TGAGTCTGCA CTGGCTGACC CCAAGGTCAT TGCTGAAAAA
GTCTTCAAGT TGCCCCACGA TTTGATTGAA CTGGATAAAC AGCTTGCCAA TCCTGAGGTG
GACACCGAGG AGGTGATAGC GCTTATCAAG CGAGATCCAG TGCTAAGTGC TGAGGTGATC
CAGTTGTGTA ATGCACCAGC ATTTCATCGG GGAGCCAAGG ATATTACCAG CTTGCAGCAG
GCGGTGGTGA TTTTGGGGCG CGAGCAGCTC AGGCGTTTTG TGAGTGCGGT TAAGGTTAGG
GAAGTTGTTG AAATTAAACC AATCTATTAC CGGCGATTTG GTGCTGAGGT ATGGCGCCAT
TCGCTTCAGG TTGCCTATCT GGCCGCCGAG TTGGCCACCG AAGATCAGGA TACAGCCTTT
ATGCTTGGGC TTATTCACGA TGTAGGCAAG ATAGCGATCT TTCAGATGTT GCTTGAGGCT
TTTGCCAAGG CCGAGCCCGG TGAGCAGCCC AGATCATGGT TGTTTCGTCA GGTTATGACA
TCCAAGTCAT TGATTTTAAG TGCTGTATTG GCGCGTTCAT GGCTGCTGCC ACCACTGTTT
TCCCGTTCAC TTGCTGCATT GGCCAATCCA GACAATATGC CGACAGAACC TCTGCCCAAA
GCTATCTGGA CAGCCAACCA CATCAGTGAG TGTTCAATGC TATGGCAGGC TGCGAGACTC
AAAGAACCAC AGCTCAATGA ATTGCTGGCA CGCATTGGTA TGGACAGGAA AACCTTTGAT
CCCCTGCACG AAAAACTCAT CCTCTTTACC CGTTGA
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| Protein sequence | MRLFSKLFNI RDNTVVERPR SLTGEGIAAK TQTRVAEKIS STPNDTDTVA APTVDVAALF
YSLLFATSHK DTGGIANNLE KRLIGNVESA LADPKVIAEK VFKLPHDLIE LDKQLANPEV
DTEEVIALIK RDPVLSAEVI QLCNAPAFHR GAKDITSLQQ AVVILGREQL RRFVSAVKVR
EVVEIKPIYY RRFGAEVWRH SLQVAYLAAE LATEDQDTAF MLGLIHDVGK IAIFQMLLEA
FAKAEPGEQP RSWLFRQVMT SKSLILSAVL ARSWLLPPLF SRSLAALANP DNMPTEPLPK
AIWTANHISE CSMLWQAARL KEPQLNELLA RIGMDRKTFD PLHEKLILFT R
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