Gene Sama_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0011 
SymbolrnpA 
ID4602268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp9802 
End bp10158 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content48% 
IMG OID639779320 
Productribonuclease P 
Protein accessionYP_925893 
Protein GI119773153 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0594] RNase P protein component 
TIGRFAM ID[TIGR00188] ribonuclease P protein component, eubacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.76804e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000546181 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACTAGCT ACACCTTTAC GCGGGAGTTA CGTTTGTTAA CTCCCGCGCA ATTTCAAGCT 
GTTTTCACCA ATCCTGTCAA AGCATCTTCT GCTGAAATCA CTTTGCTTGC TACTCCCAAC
ACTCAGGAAC ATCCTCGAGT GGGTTTAACC GTGCCCAAAA AGCAGGTTAA ACGCGCCCAT
GACCGCAACC GGGTTAAACG GGTTATTCGG GAAAGCTTCA GAATGCATCA ACACGACCTG
CCTTCATTGG ACATAGTTGT GTTGGTTCGC AAAGGGGTTA TGGATTTGGA GAATCCCGAA
CTTCACAAGC TGGTAGATAA GCTATGGCGC AAACTCAGTC GCCGTTTCAA TGGCTAG
 
Protein sequence
MTSYTFTREL RLLTPAQFQA VFTNPVKASS AEITLLATPN TQEHPRVGLT VPKKQVKRAH 
DRNRVKRVIR ESFRMHQHDL PSLDIVVLVR KGVMDLENPE LHKLVDKLWR KLSRRFNG