Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0007 |
Symbol | |
ID | 4602264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 5295 |
End bp | 6401 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639779316 |
Product | oxidoreductase, FAD/FMN-binding |
Protein accession | YP_925889 |
Protein GI | 119773149 |
COG category | [C] Energy production and conversion |
COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000696036 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTCAGG CGTTAAATTC GGGGTTTCAA TTTGCCAAAG CGGGTGTGCG GCTGAAGAAT CGTTCCGTGC TTGCTCCGCT GACTCATAAT ATGAGCGATT CCCATGGCAA CCCGAGCCCG GCGGAACTGG ATTGGCTTGA GCATTGTGCC AACGGCGGTT TTGGTCTCCT GATTGCGGCG GCAACTCAGG TGTGGCCGGG TGGTCGTTGT TGGCAGGGGC AGCCCGCTTT GATGACAGAC CTGCAGCAAC AAGCATATAG CCGTTTTGCC GAGGCGACCC GGGCCCATGG TGCTTTGGCT CTGGTACAAC TTCACCACGG TGGCGTGCGT GCCGCGCCTG CGCTGAACGG TACTGCGCCG GTTGGACCAA GCTCCGAAGC ACCGGACAGC CGTTATCCGT TGGGCGTGAC AGAACTTGAT GAAGATGCAA TTCAACAACT TATAGGTGCC TTTGTTACCG CAGCTGAGCG GGCGTATCGG GCAGGGCTTG ACGGGGTTGA GCTGCATGCC GCGCATTACT ATTTGCTCTG CAACTTTTTA AATCCCGTGC TTAACCGGCG TACCGACCGT TGGGGCGGCA GTGTTGAAAA CCGTACCCGG ATCCTGATTG AGATTATCCG GGGTATCCGG CAGCAATTGC CCCGTCAGTT TTTGGTGGGG GTGAGGTTAT CGCCCGAAAA TTACGCCAAT GTGGTCGGTA TAGAGCTTCA AAATCAACTT GCAGTTGCAA ATTTACTCGC GGCGGAAGAT ATCGACTATG TGCATTTTTC CATGGGGGAC AGTTTTAAGC TCGCCAATGG TAAAAATACG GCGCTGCTCA GCGAAGTGAT AAATGCCCTC ACCGGGAAAA CCACGCTGAT GATGGCCGGT AACATCCGTG ATGGCGAAGC GGCAGAAAGG GTGCTCAGTG CCGGAGCCGA TCTGGTCGCG ATTGGCACCT CAGCTCTTGG CAACCCGGAT TGGATTTACA AGGTAACAAA CGGGGTACCG CTGGTGACCC CTCCATTTGC AGATACCTTG TTGCAGGCTC ACGGTTTTAA TGAAGCGGGA ATCACTTATC TTGGCGCGGT TCCAGGATTG GTGGTAATTT CCAAACCCAA AACGTGA
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Protein sequence | MRQALNSGFQ FAKAGVRLKN RSVLAPLTHN MSDSHGNPSP AELDWLEHCA NGGFGLLIAA ATQVWPGGRC WQGQPALMTD LQQQAYSRFA EATRAHGALA LVQLHHGGVR AAPALNGTAP VGPSSEAPDS RYPLGVTELD EDAIQQLIGA FVTAAERAYR AGLDGVELHA AHYYLLCNFL NPVLNRRTDR WGGSVENRTR ILIEIIRGIR QQLPRQFLVG VRLSPENYAN VVGIELQNQL AVANLLAAED IDYVHFSMGD SFKLANGKNT ALLSEVINAL TGKTTLMMAG NIRDGEAAER VLSAGADLVA IGTSALGNPD WIYKVTNGVP LVTPPFADTL LQAHGFNEAG ITYLGAVPGL VVISKPKT
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