Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0003 |
Symbol | |
ID | 4602260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1522 |
End bp | 2367 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639779312 |
Product | carboxylesterase |
Protein accession | YP_925885 |
Protein GI | 119773145 |
COG category | [R] General function prediction only |
COG ID | [COG0627] Predicted esterase |
TIGRFAM ID | [TIGR02821] S-formylglutathione hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000616557 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGCTGG AATTAGTCAG TGCCAATCGC AGTTTTGATG GCTGGCACAA ACAGTACAGT CATCAATCCA GCAGCCTGGA TTGCAAGATG CGCTTTGCGA TTTTTCTGCC GCCCCAGGCC GAAACCCAAA GCGTACCAGT GCTTTATTGG CTGTCAGGGC TCACCTGCAG CGATGAAAAC TTCATGCAGA AGGCAGGCGC TCAGCGCCTG GCCGCGACGC TCGGGCTTGC GATTGTTGCC ATGGACACCA GCCCCCGCGG CGAAGGTGTG GCCGACGATC CCGATGGCGC CTGGGACTTT GGCCTGGGGG CGGGCTTTTA TCTCAATGCC ACTGAAGCGC CCTGGAATAA ACACTACCGC ATGTACGATT ATGTGGTGAA AGAGCTGCCG AAGCTGATTG AAACCAACTT TCCGGTCAGC AGCAAACGCA GCATTGCCGG CCATTCCATG GGCGGCCACG GCGCCCTGAC AATAGCGCTG AAAAACCCCG GTCGCTATGC CAGCGTGTCG GCCTTCAGCC CTATTTGTAA TCCAAGCCAA AGCCCCTGGG GACAAAAGGC CTTTGGCAAT TACCTGGGCA AAGACAGGGA AAGCTGGCGC GAGTATGACA GCTGTGAATT GATTGGCCGC GGCGCCGAAC CTATCCCCAT GCTGGTGGAT CAAGGTGATG CGGACAGCTT TTTAGAGGCA GAGCTCATGC CGCAGCGTCT GCAACATGCC GCAGACAATG CCGACTTTCC GCTGAATCTG CGAATGCAGC CTGGCTACGA TCACAGCTAC TACTTTATCG CGAGCTTTAT CGATGAACAC CTGGAGTTTC ATCATCACTG GTTGACCCGG AGATAA
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Protein sequence | MTLELVSANR SFDGWHKQYS HQSSSLDCKM RFAIFLPPQA ETQSVPVLYW LSGLTCSDEN FMQKAGAQRL AATLGLAIVA MDTSPRGEGV ADDPDGAWDF GLGAGFYLNA TEAPWNKHYR MYDYVVKELP KLIETNFPVS SKRSIAGHSM GGHGALTIAL KNPGRYASVS AFSPICNPSQ SPWGQKAFGN YLGKDRESWR EYDSCELIGR GAEPIPMLVD QGDADSFLEA ELMPQRLQHA ADNADFPLNL RMQPGYDHSY YFIASFIDEH LEFHHHWLTR R
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