Gene Noca_4690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4690 
Symbol 
ID4598234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4977012 
End bp4978331 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content72% 
IMG OID639779299 
Productaminotransferase, class I and II 
Protein accessionYP_925872 
Protein GI119718907 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAGCC AGCCCGTCCG CGCGACCACC CGCCTCGACT CCTACGTCGA CCGGTACGCC 
GCGCGCACGG CCGGGATGAC GGCCTCGGAG ATCCGGGCGC TGTTCTCGGT GGCGTCGCGG
CCCGAGGTGG TCTCCCTGGC CGGCGGGATG CCGAACATCT CCGGGCTGCC GCTCGACGTG
GTCGGCGGCG CCATCTCCGA GCTGGTCGCC ACCCAGGGCC CGGTCGCGAT GCAGTACGGC
TCCGGCCAGG GCGTGCCGGA GCTGCGCGAG CAGATCTGTG ACGTGATGCG GCTCGAGGGC
ATCGACGCGC ACCCCGACGA CGTGGTGGTC ACCGTCGGGT CGCAGCAGGC GGTCGACCTG
GTCACCCGGA TCTTCTGCGA CCCCGGGGAC GTCGTGATCT GCGAGGCCCC GTCGTACGTC
GGCGCGCTCG GGGTGTTCAA GGCCTACCAG TGCGACGTCG TGCATGCCGA GATGGACGCG
GACGGCCTGG TCCCCGACGC ACTGCGTCAG GCCATCGCGG TCACCAAGGC GGCCGGCAAG
AGGATCAAGT TCCTCTACAC GATCCCGAAC TTCCACAACC CGGCCGGCGT CACGTTGTCC
GCGGCCCGGC GCCAGGAGGT GCTGGAGATC TGCCGCACCG AGGACATCTT GGTGCTCGAG
GACAACCCCT ACGGTCTGCT CGGGTTCAGC GGCGAACCGA TGCGCGCGCT GCGCGCGGAC
GAGGCCGAGG GCGTGATCTA CCTCGGCTCG TTCTCCAAGA CCTTCGCCCC CGGCTTCCGG
GTCGGCTGGG CGCTGGCCCC GCACGCGGTC CGCGAGAAGC TGGTGCTGGC CCAGGAGTCG
GCGACCCTGT GCCCGCCGCA GTTCTCGCAG ATGGCGGTCT CGGCGTACCT CTCCGGCCAC
GACTGGCAGG GCCAGATCAA GCAGTTCCGG GAGATGTACC GCGAGCGCCG GGACGCGATG
GTCCAGGCGC TCGACGACCT GATGCCGGCG GCGTGCCGCT GGAACGTCCC GGACGGCGGC
TTCTACGTCT GGCTCACGCT GCCCCCCGGG ATCGACGCCA AGGCGATGCT GCCCCGCGCC
GTCACCGCCC GGGTCGCCTA CGTCCCCGGC ACGGCGTTCT TCGCCGACGG GTTCGGCTCG
GGCTCGATGC GGCTGTCGTT CTGCTACCCG ACGCCCGAGC GGATCCGCGA GGGCGTACGC
CGGCTGGCGG GCGTGCTCGA GGCGGAGATG GAGCTGCGCG AGACGTTCGG GGCCAGCGCC
CCGACCCGCG AGCTCGAGGG CCGCAGCGGG TACGACGCCC CCAGCTCGGA CCTGACCTGA
 
Protein sequence
MESQPVRATT RLDSYVDRYA ARTAGMTASE IRALFSVASR PEVVSLAGGM PNISGLPLDV 
VGGAISELVA TQGPVAMQYG SGQGVPELRE QICDVMRLEG IDAHPDDVVV TVGSQQAVDL
VTRIFCDPGD VVICEAPSYV GALGVFKAYQ CDVVHAEMDA DGLVPDALRQ AIAVTKAAGK
RIKFLYTIPN FHNPAGVTLS AARRQEVLEI CRTEDILVLE DNPYGLLGFS GEPMRALRAD
EAEGVIYLGS FSKTFAPGFR VGWALAPHAV REKLVLAQES ATLCPPQFSQ MAVSAYLSGH
DWQGQIKQFR EMYRERRDAM VQALDDLMPA ACRWNVPDGG FYVWLTLPPG IDAKAMLPRA
VTARVAYVPG TAFFADGFGS GSMRLSFCYP TPERIREGVR RLAGVLEAEM ELRETFGASA
PTRELEGRSG YDAPSSDLT