| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4676 |
|---|
| Symbol | |
|---|
| ID | 4598220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4955357 |
|---|
| End bp | 4957693 |
|---|
| Gene Length | 2337 bp |
|---|
| Protein Length | 778 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639779285 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_925858 |
|---|
| Protein GI | 119718893 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGGTA AGCGCAGGGC CGCAGGCCCC GCCAGCAAGA CGACCGCCTC CAAGCCGGGC
AGCAAGCCCA AGCGTCCCCG CACCCGCAAG CAGCAGGCGC TGCGGGTCGC GAAGTGGGGC
TCGATCGTGG GCCTGGCGCT CCTGCTGATC GCCGTCGGCG GGTTCGTCTT CCTCTACAAG
ACGATCGACA TCCCGGACCC GAACGCCGAC TTCGAGGCCG AGACGTCGTT CGTCTACTAC
GCCGACGGCA AGGCCCAGGT CGGCAACTTC GCCACCCAGA ACCGTGAGTC GATCACGCTC
AAGCAGATGC CCCAGACGCT CCAGGACGCG GTGGTCGCCG CGGAGAACCG GTCCTTCCGG
ACCGACAACG GCATCGACCC GAAGGGGATC CTGCGCGCCG CCTTCAGCAA CGCGCAGGGC
AACTCGACCC AGGGTGCGTC GACGATCACC CAGCAGTACG TCAAGATCCT CTACCTCAAT
CAGGAGCGTT CCTACACCCG CAAGGTGAAG GAGGCGATCC TGTCGCTGAA GATCCAGCGC
ACGAAGAGCA AGTCGGAGAT CCTCGAGGGC TACCTCAACA CGATCTACTT CGGGCGCGGG
GCGTACGGCG TGCAGGCGGC CTCCCGGGCG TTCTTCGACA AGGACGCCAA GGACCTCTCC
CTGAAGGAGT CGGCCGTCCT CGCGAGCGTG CTGAACAACC CCTCGCGCTT CGACCCGGCC
AACGGCAAGG ACAACAAGCG GGCGCTCAAG GAGCGCTACG CCTACGTCCT CGACGGGATG
GCCGACGCCG GCAACATCAC CGCCGAGCAG GCCGACAAGG CCGAGAAGTC GCTGCCGAAG
TTCCCGGAGA TCAAGGCGGA GAGCAAGTAC GGCGAGCAGC GCGGCCACAT GCTCAAGCTG
GTGCGCGACG AGATGCACGA GCTCGGCTAC ACCGACGAGC AGATCGACAG CCAGGGCTAC
CGGATCACCA CTACGTTCAC GCAGAAGGCC ATGGACGCCG CGAAGGCCGG CGTGCTGGAG
CAGCGGCCCG AGGGCTTCAA GGACAAGGAG CTGCACATCG GGGTCGCGAG CGTCGAGCCC
GGCACCGGTG CGCTGCGCGG GTTCTACGGC GGTCAGGACT ACCTGGACTC CCAGATCAAC
TGGGCGGCCA CCGGCGGGAT GGTCGGCTCG ACGATCAAGC CGATCACGGT CGCCACGGCC
CTGGAGAACG GCTACTCGCT CAAGGACACC TTCGAGGGCA ACTCGCCGTA CGTCTTCCCC
GACGGCCTCG ACGTGGTCAA CGAGGGTCCC GGCGACGGCA ACGACTACGG CGCCAAGGTC
AGCCTGACCC TCGCGACCGA GCAGTCGATC AACACCGCCT TCGTCGACAT GTCGAACTCG
ATCCCCGACG GGCCGGCGAA GATCGTCGAG ACCGCGAACA AGGTCGGGAT CCCGCCGGCG
GACCCGACGA AGAAGTACCC CGGGATCCCC GACAAGAGCA TCGACCTCGA ACCGGACGCG
CTGGTCACCC TCGGCAAGGC GCGGATCAGC CCGATCAACA TGGCCAACGC CTACGCGACG
ATCGCGAACG GCGGCGAGCG CGCCGACGTG CACGTGATCG ACAAGATCGT GAGCCGCAAG
GGCGAGGTGC TCTACTCCTT CAAGCAGCAC ACCACCCCGG CGTTCGACGA CTTCGCCGAC
GGCGTCGACG TGACGACCGC GTCCGGGCAG AAGGCGACCA GCGAGGACAT CGCCGCCGAC
ACCTCCTACG CCCTGCAGCA GGTGGTCGCG AACGGCACCG GCCGCAACGC GCTGGCCCTG
GGTCGTCCGG CGGCCGGCAA GACCGGCACG GCCACCAACG ACGACGGCGA CGTCTCCTCG
TCGTGGTTCG TCGGGTACAC CCCGCAGCTC GCGACGGCCG TCATGTACGT CCGCGGCGAC
GGCGACAACG CGCTCAACGA CTGGCTGCCG TCGTACTTCG GTGCGGAGTA TCCGACCCGC
ACCTGGACCG CCGTGATGAG CCGCGCCCTC GAGGGCACCG AGGTGGAGAG CTTCCCCGAG
CCGGCGAACG TCGACGGCGA GGCGCCGGCC GACGGGCACG AGCCGTACAC GCCGCCGCCG
AAGCCGACCA AGACCCCGAA GCCGAGCGAG ACGCCGAGCG AGACGCCGTC GGAGTCCTCG
ACCCCGACCC CGACCGAGAC GCCCACCCCG ACCGAGTCGC CGAGCGACAG CTGCGGCCTG
CTCGGGTGCG GCTCGCCGTC GGGCTCGCCG TCGTCCTCGG ACAGCCCGAG CACGCCGCCG
AGCGGGGGCG CCTCGCCGAG CGGCGGGGGC CGCGGCCGTC GACCGCGGCG CGGCTGA
|
|---|
| Protein sequence | MSGKRRAAGP ASKTTASKPG SKPKRPRTRK QQALRVAKWG SIVGLALLLI AVGGFVFLYK
TIDIPDPNAD FEAETSFVYY ADGKAQVGNF ATQNRESITL KQMPQTLQDA VVAAENRSFR
TDNGIDPKGI LRAAFSNAQG NSTQGASTIT QQYVKILYLN QERSYTRKVK EAILSLKIQR
TKSKSEILEG YLNTIYFGRG AYGVQAASRA FFDKDAKDLS LKESAVLASV LNNPSRFDPA
NGKDNKRALK ERYAYVLDGM ADAGNITAEQ ADKAEKSLPK FPEIKAESKY GEQRGHMLKL
VRDEMHELGY TDEQIDSQGY RITTTFTQKA MDAAKAGVLE QRPEGFKDKE LHIGVASVEP
GTGALRGFYG GQDYLDSQIN WAATGGMVGS TIKPITVATA LENGYSLKDT FEGNSPYVFP
DGLDVVNEGP GDGNDYGAKV SLTLATEQSI NTAFVDMSNS IPDGPAKIVE TANKVGIPPA
DPTKKYPGIP DKSIDLEPDA LVTLGKARIS PINMANAYAT IANGGERADV HVIDKIVSRK
GEVLYSFKQH TTPAFDDFAD GVDVTTASGQ KATSEDIAAD TSYALQQVVA NGTGRNALAL
GRPAAGKTGT ATNDDGDVSS SWFVGYTPQL ATAVMYVRGD GDNALNDWLP SYFGAEYPTR
TWTAVMSRAL EGTEVESFPE PANVDGEAPA DGHEPYTPPP KPTKTPKPSE TPSETPSESS
TPTPTETPTP TESPSDSCGL LGCGSPSGSP SSSDSPSTPP SGGASPSGGG RGRRPRRG
|
|---|
| |