| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4657 |
|---|
| Symbol | |
|---|
| ID | 4596518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4934880 |
|---|
| End bp | 4937354 |
|---|
| Gene Length | 2475 bp |
|---|
| Protein Length | 824 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639779266 |
|---|
| Product | DnaB domain-containing protein |
|---|
| Protein accession | YP_925839 |
|---|
| Protein GI | 119718874 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0305] Replicative DNA helicase |
|---|
| TIGRFAM ID | [TIGR00665] replicative DNA helicase
[TIGR01443] intein C-terminal splicing region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.186052 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGTCA CCGAGCAGGG CCCGCGAGGG CTGCCGGAGC CGCCGATCGA CGACTGGGGC
GATGGTCCGG CGGCGTACGC CCCGGGCGAA CGGCCCACGT CGCCGGGCGA CCGGACGCCC
CCGCAGGACA TGGCCGCCGA GCAGTCGGTG CTCGGCTCGA TGCTGATCTC CAAGGACGCC
ATCGCCGACG TCGCGGAGGT GCTGCGCGGG GTCGACTTCT ACCGGCCCTC GCACGAGACC
ATCCACGACG CGATCATCGA CCTCTACGGG CGCGGCGAGC CGGTCGACAT GGTCACCGTC
GCGGCCGAGC TGCAGCGCCG CGGCGAGCTC CAGCGGATCG GCGGCGCGCC GTACCTCCAC
ACGCTGTCCG CGAACGTGCC GATCGCCGCC AACGCCGGCT ACTACGCCGA GATCGTCCGC
GAGAAGGCGA TCCTGCGCCG CCTGGTCGAC GCCGGCACCA AGATCGTCCA GATCGGCTAC
GCCGGCGAGG GCCAGGTCGA CGACATCGTC GACACCGCGC AGGCGGAGGT CTACAAGATC
ACCGACCGCC GCGCCGCGGA GGACTACGCG CCGCTGAGCG ACATCATGGA CGGCGTCCTC
GACGAGATCG AGGCGATCGG CAACCGCGAG GCCGGCCTGT ACGGCGTCCC GACCGGCTTC
GCCGACCTCG ACGACCTGAC CAACGGCCTG CACTCCGGAC AGATGATCAT CGTCGCGGCG
CGCCCCGCCA TGGGCAAGGC GCTCGCCCTG GACACCGCGC TGCCCACCCC CTCCGGCTGG
ACGACGATGG GCGACGTCCA GGTCGGCGAC CAGCTGTACG ACGCCCACGG CAGGCCGACC
ACCGTCGTGG CGGCCACGGA GGTGCTGACC GGTCGCCCTT GCTACGAGGT CGAGTTCTCC
GACGGCTCGC GGATCGTCGC CGACGCCCAG CACCAGTGGC TCACCGAGAG CCGTGCTGCA
CGGAAGTCGA GGTGGGCGGC GGACAAGCAG TACAACCGCG CCCGAAACCA GAACATCGTC
GCGTCCGTGG TCACCACCGA GGCGATCGCG GGCACGCTTC GAGTCGGTGC GGATCAACGT
GCGAACCATG CCGTGCTGAC GGCGGATCCG TTGTCGGGCA GCGACGTCGA CCTACCGATT
CCGCCGTACG TGCTCGGCGC GTGGCTCGGC GACGGTCACA GTGCCTCCGC ACGGATCACA
TGCGAGACGC CGGAGATCCC GATGTACCTC GAGGCGTGTG GACTGAGGGT CGACCACCAA
GGAGCGATGC TCTACAGCCT CAAGTTCCCC GACGGAGATC CGCGCGGCAG CGTTCAGGGT
GTGCTGCGGA CCATCGGCGT GCTGAACGAC AAGCACATCC CCGCTGACTA CCTGCGCGCG
TCCGAGGGGC AGCGCCGCGA CCTCCTGGCC GGGCTGATGG ACACCGATGG CACCGTCGTG
AGGGGCGTCG GCTCGTGCCA GTTCGCCGTG ACCAACAAGC GCCTCGCCGA CGACGTCTAC
GAGCTGGTCG TCAGTCTCGG CTACAAGTGT GGACGCACGA CACGGCGGGT GCAGGGCCGA
TCCCCGGAGA CCTCGACCTG CCACATCCTC AACTTCTCGA CCGTCGACGA CGTCTTCCGG
CTGGAGCGCA AGCACCTCCT CCACAAGGAA GAGCGGCCGG TGACCAGGGC GCGGATCGCA
CGCCGCTACA TCACCGCCGT GCGTCCGATC GAGAGCGTCC CGGTCCGGTG CGTCGAGGTG
GACAACACCG AGCACCTCTA CCTCGCCGGC GAGTCGATGA TTCCGACGCA CAACTCGACG
CTCGCGCTCG ACCTGTGCCG TGCGGCGTCG ATCCACAACA ACCTCACGAG CGTGTTCTTC
AGCCTGGAGA TGACCCGCTC GGAGATCACC ATGCGGCTGC TCTCGGCCGA GGCGAAGGTG
CCGCTCAACC ACATCCGCAA CGGCAACATG AATGACGACG ACTGGGCCAA GCTGGCCCGC
AAGATGGGCG AGGTGTCCTC GGCGCCGATG TTCATCGACG ACTCGCCGAA CATGACGATG
ATGGAGATCC GCGCGAAGGC GCGACGGCTC AAGCAGCGCC ACGACCTGCG GTTGGTCGTC
ATCGACTACA TGCAGCTGAT GACGTCGGGG CGCAAGGTGG AGTCCCGCCA GCTGGAGGTC
TCGGAGTTCT CCCGGCAGAT CAAGCTGCTG GCCAAGGAGC TCGAGGTCCC GATCATCGCG
CTCTCCCAGC TCAACCGTGG CCCGGAGCAG CGCGGCGATA AGAGACCTAT GATGAGTGAC
TTACGCGAGT CTGGGTCTTT GGAACAAGAT GCGGACATGG TCATCCTCTT GCACCGCGAC
GACGTCTACG AGAAGGAGTC GACCCGCCCC GGCGAGGCCG ACCTGATCGT GGCCAAGCAC
CGCAACGGCC CGACCCGCGA CATCACCGTG GCCTTCCAGG GCCACTACTC CCGCTTCGTC
GACATGGCCC ACTGA
|
|---|
| Protein sequence | MSVTEQGPRG LPEPPIDDWG DGPAAYAPGE RPTSPGDRTP PQDMAAEQSV LGSMLISKDA
IADVAEVLRG VDFYRPSHET IHDAIIDLYG RGEPVDMVTV AAELQRRGEL QRIGGAPYLH
TLSANVPIAA NAGYYAEIVR EKAILRRLVD AGTKIVQIGY AGEGQVDDIV DTAQAEVYKI
TDRRAAEDYA PLSDIMDGVL DEIEAIGNRE AGLYGVPTGF ADLDDLTNGL HSGQMIIVAA
RPAMGKALAL DTALPTPSGW TTMGDVQVGD QLYDAHGRPT TVVAATEVLT GRPCYEVEFS
DGSRIVADAQ HQWLTESRAA RKSRWAADKQ YNRARNQNIV ASVVTTEAIA GTLRVGADQR
ANHAVLTADP LSGSDVDLPI PPYVLGAWLG DGHSASARIT CETPEIPMYL EACGLRVDHQ
GAMLYSLKFP DGDPRGSVQG VLRTIGVLND KHIPADYLRA SEGQRRDLLA GLMDTDGTVV
RGVGSCQFAV TNKRLADDVY ELVVSLGYKC GRTTRRVQGR SPETSTCHIL NFSTVDDVFR
LERKHLLHKE ERPVTRARIA RRYITAVRPI ESVPVRCVEV DNTEHLYLAG ESMIPTHNST
LALDLCRAAS IHNNLTSVFF SLEMTRSEIT MRLLSAEAKV PLNHIRNGNM NDDDWAKLAR
KMGEVSSAPM FIDDSPNMTM MEIRAKARRL KQRHDLRLVV IDYMQLMTSG RKVESRQLEV
SEFSRQIKLL AKELEVPIIA LSQLNRGPEQ RGDKRPMMSD LRESGSLEQD ADMVILLHRD
DVYEKESTRP GEADLIVAKH RNGPTRDITV AFQGHYSRFV DMAH
|
|---|
| |