| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4601 |
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| Symbol | |
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| ID | 4598699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 4875022 |
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| End bp | 4876791 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639779210 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_925783 |
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| Protein GI | 119718818 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAGCG ACGAGCAGGA CGACACGACC ACCCCCGAGG TGACGTTCGC CGACCTCGGG
CTCAGCGACC AGGTGCTGAA GGCGCTGGCC GACGTCGGGT ACGAGAAGCC CTCCGCGATC
CAGGCCGCCA CGATCCCACC GCTCCTGGCC GGCCGTGACG TCGTCGGCCT CGCGCAGACC
GGCACCGGCA AGACCGCGGC GTTCGCGCTG CCGATCCTCT CTCGGCTGGA CCTCACGCAG
ACGACGCCGC AGGCGCTGGT GCTGGCGCCG ACCCGCGAGC TCGCGCTCCA GGTCTGCGAG
GCGTTCGAGC GGTACGCCGC GCACGTCAAG GGCGTGCACG TGCTGCCGGT GTACGGCGGG
CAGGGCTACG GCGTCCAGCT CAGCGCGCTG CGTCGCGGCG TGCACGTCGT CGTCGGCACC
CCCGGCCGGA TCATGGACCA CCTGGAGAAG GGCACGCTCG ACCTGTCCGA GCTGCGCTTC
CTGGTCCTCG ACGAGGCCGA CGAGATGCTG AACATGGGCT TCGCCGAGGA CGTCGAGACG
ATCCTGGCCG ACACCCCCGA CGACAAGAAC GTCGCGCTGT TCTCGGCCAC GATGCCCGCG
CAGATCCGCC GGATCTCGAA GAAGTACCTC GACGACCCCG CCGAGATCAC CGTCAAGGGC
AAGACGGCCA CCGCCTCGAA CATCACCCAG CGCTACCTGA CGGTGTCCTA CCCGCAGAAG
GTCGACGCCC TCACCCGGAT CCTCGAGGTC GAGAACTTCG AGGGCATGAT CGTCTTCGTC
CGCACCAAGA ACGAGACCGA GACGCTGGCC GAGAAGCTCC GAGCCCGCGG CCTGTCCGCG
ATGGCGATCA ACGGCGACGT CGCCCAGGCG CAGCGCGAAC GCACGGTCAA CCAGCTGAAG
TCGGGCAAGC TCGACATCCT GGTCGCCACC GACGTCGCCG CCCGCGGCCT GGACGTCGAA
CGGATCAGCC ACGTCGTGAA CTACGACATC CCCACCGACA CCGAGTCCTA CGTGCACCGG
ATCGGGCGCA CCGGGCGGGC CGGGCGCAGC GGCGACGCGA TCTCGTTCGT CACCCCCCGC
GAGCGCTACC TGCTCAAGCA CATCGAGAAG GCGACCCGGC AGCCGCTGAC CCAGATGCAG
CTGCCCACCG TCGAGGACGT CAACAGCACC CGTCTGTCCC GCTTCGACGA CGCGATCACC
GAGGCGCTCT CGCAGACCCA GCGGATCGAC GCGTTCCGCG ACATCGTCGC CCACTACGTC
CGCGAGCACG ACGTGCCCGA GGCCGACGTC GCCGCGGCCC TCGCGGTGGT GGCCCAGGGG
GAGACCCCGC TGCTGCTCGA TCCGGCCGAC CGCGCGAACG AGCTCCGGGC GCCCCGCGAG
GAGCGCGCCG GCCAGGGCAC CCGCCGGGAC CGCCACGACC ACGGCGGCCC CGGCGGCCAC
GGCGGCCCGC CTCGCGAGCG CCGGCCCCGC GGGCGCAGCG ACGTCCCGAT GGCGACGTAC
CGGATCGCGG TGGGCAAGCG ACACAAGGTC GAGCCTCGCC AGATCGTCGG GGCGATCGCC
AACGAGGGCG GCCTGTCGCG CCAGGACTTC GGGCACATCG ACATCCGCGG CGACCACTCG
CTGGTCGAGC TGCCCGCCGA CCTCCCGGCC GGCGCGTGGG ACAGCCTGCG CTCGACCCGG
ATCTCCGGGA AGCTGATCGA GCTCACCCGC GACGGCGGCG GCCCCGCGGC CGACACCCGA
CACAAGAAGC CCCGCCACAA GACCCGTTGA
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| Protein sequence | MSSDEQDDTT TPEVTFADLG LSDQVLKALA DVGYEKPSAI QAATIPPLLA GRDVVGLAQT
GTGKTAAFAL PILSRLDLTQ TTPQALVLAP TRELALQVCE AFERYAAHVK GVHVLPVYGG
QGYGVQLSAL RRGVHVVVGT PGRIMDHLEK GTLDLSELRF LVLDEADEML NMGFAEDVET
ILADTPDDKN VALFSATMPA QIRRISKKYL DDPAEITVKG KTATASNITQ RYLTVSYPQK
VDALTRILEV ENFEGMIVFV RTKNETETLA EKLRARGLSA MAINGDVAQA QRERTVNQLK
SGKLDILVAT DVAARGLDVE RISHVVNYDI PTDTESYVHR IGRTGRAGRS GDAISFVTPR
ERYLLKHIEK ATRQPLTQMQ LPTVEDVNST RLSRFDDAIT EALSQTQRID AFRDIVAHYV
REHDVPEADV AAALAVVAQG ETPLLLDPAD RANELRAPRE ERAGQGTRRD RHDHGGPGGH
GGPPRERRPR GRSDVPMATY RIAVGKRHKV EPRQIVGAIA NEGGLSRQDF GHIDIRGDHS
LVELPADLPA GAWDSLRSTR ISGKLIELTR DGGGPAADTR HKKPRHKTR
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