| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4590 |
|---|
| Symbol | |
|---|
| ID | 4598688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4860097 |
|---|
| End bp | 4861653 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639779199 |
|---|
| Product | FAD linked oxidase domain-containing protein |
|---|
| Protein accession | YP_925772 |
|---|
| Protein GI | 119718807 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0387906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCCGT CCCGCTGGGG CGATCCGACC CGCGCCCGCG CGCTCCCCGA CGAGGCGCGC
GGCCTGGTCG AGATGGTGTT CGGTGTCGAC GACCGCCCCA CCGTCGCGCA CCCGGCCCTC
GCGCCGTCCG CGCTCGCGCC CGACCTGGTC GCTGGGCTCG AAGAGGTCGT CGGCGTGGGC
CACGTGCTGA TCGACGACGC GACCCGGCGG CTGCGCACCC GCGGCAAGTC CACCCCGGAC
CTGCTCCGCG CCCGCGCCGG CGACCTCGCC GACGCCCCGG ACGCCGTGGT CCGCCCCGGC
AGCCACGACG AGGTCGCCGC AGTGCTCGCC TTCGCGGTCG AGCACCACCT GGCGGTGGTG
CCGTTCGGCG GCGGTACGTC GGTCACCGGG GGGCTGGTCG CCCGCCGCGA GGGCTTCGCG
GCCGTGCTCA GCCTGGACCT GGTGCGGATG AAGCGGCTGC TCGCGGTCGA CCACGTCTCG
ATGACGGCGA CCCTCGAGCC CGGCCTGCGC GGCCCGGAGG CCGAGGCGCT GCTGGCCGCC
GAGGGGATGA CGATCGGGCA CTTCCCGCAG TCCTTCGAGT ACGCCAGCCT CGGTGGCTTC
GCCGCCACCC GCTCCAGCGG CCAGTCCAGC GCCGGGTTCG GCCGCTTCGA CGCGCTGGTC
GTCGGGCTGA CCGTGGCCAC CCCCCAGGGC CGGATCGTCC TCGGCACGGC ACCGGCCAAC
GCCGCGGGCC CGGACCTGCG CCAGCTCTTC CTCGGCTCGG AGGGCACCCT CGGGGTGATC
ACCTCCCTGA CCCTGCGGGT CCGGCCCGTG CCGGCGGTGC AGGTGTACGA GGCCTGGCGC
TGGCCGTCGT TCGCCGACGG TGCCACCGCC ATGCGGACCC TGGCCCAGGC CGGGCTGCTG
CCCACGGTGC TGCGGCTCTC CGACGAGTCG GAGTCGGCGA TCAACCTCGC CGACCCGGCC
GCGATCGGCG GGGAGTCTGC GGGAGGCTGC CTGATGGTCG TCGGTTTCGA GGGCGAGCCG
GCCGCGGTCG AGGCGAAGCG GTCCGCCGTC ACGGCGGTCT TCGAGGGCCT CGGCGGCACC
GGCGTCGGCA CCGGCCCGGG GGAGAAGTGG GCACACGGGC GCTACGACGC GCCGTACCTG
CGTGACTCGC TGCTCGACGC CGGGGTGCTC GTGGAGACGT TGGAGACCGC GACGTTCTGG
TCGAACCTCG ACCGCCTCTA CACCGGCGTG AAGACCGCGC TCGAGACCTC CCTCGGCCAG
CCGTCGCTGG TGCTCTGCCA CATCTCGCAC GTCTACGAGA CCGGCGCCTC GCTCTACTTC
ACCGTGGCCG CGAAGGAGAC CGACGACCCG CTGGGCCAGT GGCGGGTGGC CAAGGCGGCC
GCCAGCGACG CGATGCTCGC GGCCGGTGCG ACGATCACCC ACCACCACGC GGTCGGCACC
GACCACTTGC CGTGGTTCGA GCGCGAGATC GGCCCCGTCG GCGTCTCGAT CCTGCGGGCG
GTCAAGGCCG ACCTGGACCC GACCGGGGTG CTCAACCCGG GGGTGCTGAT CCCGTGA
|
|---|
| Protein sequence | MHPSRWGDPT RARALPDEAR GLVEMVFGVD DRPTVAHPAL APSALAPDLV AGLEEVVGVG
HVLIDDATRR LRTRGKSTPD LLRARAGDLA DAPDAVVRPG SHDEVAAVLA FAVEHHLAVV
PFGGGTSVTG GLVARREGFA AVLSLDLVRM KRLLAVDHVS MTATLEPGLR GPEAEALLAA
EGMTIGHFPQ SFEYASLGGF AATRSSGQSS AGFGRFDALV VGLTVATPQG RIVLGTAPAN
AAGPDLRQLF LGSEGTLGVI TSLTLRVRPV PAVQVYEAWR WPSFADGATA MRTLAQAGLL
PTVLRLSDES ESAINLADPA AIGGESAGGC LMVVGFEGEP AAVEAKRSAV TAVFEGLGGT
GVGTGPGEKW AHGRYDAPYL RDSLLDAGVL VETLETATFW SNLDRLYTGV KTALETSLGQ
PSLVLCHISH VYETGASLYF TVAAKETDDP LGQWRVAKAA ASDAMLAAGA TITHHHAVGT
DHLPWFEREI GPVGVSILRA VKADLDPTGV LNPGVLIP
|
|---|
| |