Gene Noca_4576 details

Gene Information

• Locus tag: Noca_4576
• ID: 4598674
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 4843418
• End bp: 4843963
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 639779185
• Product: PadR family transcriptional regulator
• Protein accession: YP_925758
• Protein GI: 119718793
• COG category: [K] Transcription
• COG ID: [COG1695] Predicted transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCCTCG AGCACGCCCT CCTCGTCGCG CTGCGCGAGC AGCCGGCGTC CGGCCTGGAC 
CTCGCGAAGC GCTTCGACCG CTCGATCGGG TTCTTCTGGC ACGCCACGCA CCAGCAGATC 
TACCGGGTGC TGGCCCGGAT GGACGCCGAC GGCTGGGTCC GGGTCACCAC GGTCGAGCAG 
ACCGGGCGGC CGGACAAGAA GGTGTACGAC GTCACGCCGG CCGGCGCCGA GGTGCTCGGC 
TCCTGGCTGG CCGCGCCGTC GGAGGCCGAG CCGCTGCGCA GCGAGCTCGC GGTCAAGCTG 
CGCGGCGCGT CGTTCGGGGA CCGCGACGCC GTGCTGGAGG TGGTGCGCGG CAACCTGGCC 
GACCACCGGC TCCGCCTGGA CCACTACCGC GGCCTGATGG CGCGCGACTA TCCCCGACCC 
GACGAGCTCC GCGACCCGCT CGAGCTCGAC CAGTACCTCG TGCTGCGCGG CGGCATCCTC 
CTGGAGGAGA TGTGGATCGC ATGGCTGACC GAGTACCTCG ACCGACACGA CAAGGCACGC 
CGATGA 

 

Protein sequence

MALEHALLVA LREQPASGLD LAKRFDRSIG FFWHATHQQI YRVLARMDAD GWVRVTTVEQ 
TGRPDKKVYD VTPAGAEVLG SWLAAPSEAE PLRSELAVKL RGASFGDRDA VLEVVRGNLA 
DHRLRLDHYR GLMARDYPRP DELRDPLELD QYLVLRGGIL LEEMWIAWLT EYLDRHDKAR 
R