Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4549 |
Symbol | |
ID | 4597068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 4811925 |
End bp | 4813184 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639779160 |
Product | DNA polymerase IV |
Protein accession | YP_925733 |
Protein GI | 119718768 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.849423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTTCGATA CTGGCCTGGT GGGACGGATC GCGAGCAGGG CCGAGGCGAG CATCCTGCAC GCCGACCTGG ACTCGTTCTT CGCCTCGGTC GAGCAGCGCG ACGATCCACG GCTGCGCGGC CGGCCGGTGA TCGTCGGCGG CGGGGTGGTC CTGGCCGCGA GCTACGAGGC CAAGGCGTTC GGGGTGCGCT CGGCGATGGG TGGGCGCGAG GCCGCGCGGC GCTGTCCGGA TGCGCTGGTG GTGCCACCGC GGTTCTCGGC GTACGTCGAG GCCAGCAAGC AGGTCTTCGC GATCTTCGAG GACACCACGC CGCTGGTCGA GGGGATCTCG ATCGACGAGG CGTTCCTCGA CGTCGGGGGG CTGCGCCGGC TGGTCGGCCC GCCCGAGCAG ATCGGCCGCG GCCTGCGGGC CCGGGTGAAG GACGAGGTCG GGCTGCCGAT CTCGGTCGGG ATCGCGCGCA CCAAGTACCT CGCGAAGGTC GCGAGCGCGG TGTCCAAGCC CGACGGGCTG CTCGCGGTGT CGCCCGACGG CGAGCAGGCG TTCCTCCACC CGCTGCCGGT CGAGCGGCTC TGGGGGGTCG GTGCGGTCAC GGCGGCCAAG CTGCACGCGG AAGGCATCCG CAGCATCGGC GAGCTCGCGG CCCGCGAGGA GGTCGAGCTG ACCGCGACCG TCGGCCGGGC CGCCGGCCGG CACCTGTGGG CGCTGGCGAA CCTGCTCGAC CCGCGCCCGG TCGAGGTGGG CCGGCGGCGC CGCTCGATCG GCTCGCAGTG CGCGATCGGC CGGCCCGGGA GACCGAAGAG CCGCGGCGAC CTGGAGGCGC TGCTGGCCGG TCTGGTCGAC CGGGTGGCCC GCCGGCTGCG GGCGGGGGAA CGGATCGGCC AGACGTTCAC GCTCCGGCTC CGGTTCGACG ACTTCAGCCG AGCGACCCGC TCCGCGACGC TGGCACACTC GACCGCGACC ACCGCGACCT GGCTGGAGAC CGGGCGGCGA CTGCTCGCCG CCAGCTGGCC GCTCATCGAG GAGCGCGGCT GCACCCTCCT CGGTGTCACG ATCTCCGGGC TGGTCGACGG CCGGTCCCAG CAGCTCGAGC TGCCGCTGTT CCCCGACACC GTGCACGAGC ACGGCCTCGA CGCCGCGCTC GACCGGGTCC GCGACCGGTT CGGCTCGGCG TCGGTGACCC GGGCGGTCCT GGTCGGTCGG CGCACCGGCC TCGAGATGCC CACGCTCCCC GACCCCGGGC CGCCGACGCC GGTACCGTGA
|
Protein sequence | MFDTGLVGRI ASRAEASILH ADLDSFFASV EQRDDPRLRG RPVIVGGGVV LAASYEAKAF GVRSAMGGRE AARRCPDALV VPPRFSAYVE ASKQVFAIFE DTTPLVEGIS IDEAFLDVGG LRRLVGPPEQ IGRGLRARVK DEVGLPISVG IARTKYLAKV ASAVSKPDGL LAVSPDGEQA FLHPLPVERL WGVGAVTAAK LHAEGIRSIG ELAAREEVEL TATVGRAAGR HLWALANLLD PRPVEVGRRR RSIGSQCAIG RPGRPKSRGD LEALLAGLVD RVARRLRAGE RIGQTFTLRL RFDDFSRATR SATLAHSTAT TATWLETGRR LLAASWPLIE ERGCTLLGVT ISGLVDGRSQ QLELPLFPDT VHEHGLDAAL DRVRDRFGSA SVTRAVLVGR RTGLEMPTLP DPGPPTPVP
|
| |