Gene Noca_4549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4549 
Symbol 
ID4597068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4811925 
End bp4813184 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content75% 
IMG OID639779160 
ProductDNA polymerase IV 
Protein accessionYP_925733 
Protein GI119718768 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.849423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCGATA CTGGCCTGGT GGGACGGATC GCGAGCAGGG CCGAGGCGAG CATCCTGCAC 
GCCGACCTGG ACTCGTTCTT CGCCTCGGTC GAGCAGCGCG ACGATCCACG GCTGCGCGGC
CGGCCGGTGA TCGTCGGCGG CGGGGTGGTC CTGGCCGCGA GCTACGAGGC CAAGGCGTTC
GGGGTGCGCT CGGCGATGGG TGGGCGCGAG GCCGCGCGGC GCTGTCCGGA TGCGCTGGTG
GTGCCACCGC GGTTCTCGGC GTACGTCGAG GCCAGCAAGC AGGTCTTCGC GATCTTCGAG
GACACCACGC CGCTGGTCGA GGGGATCTCG ATCGACGAGG CGTTCCTCGA CGTCGGGGGG
CTGCGCCGGC TGGTCGGCCC GCCCGAGCAG ATCGGCCGCG GCCTGCGGGC CCGGGTGAAG
GACGAGGTCG GGCTGCCGAT CTCGGTCGGG ATCGCGCGCA CCAAGTACCT CGCGAAGGTC
GCGAGCGCGG TGTCCAAGCC CGACGGGCTG CTCGCGGTGT CGCCCGACGG CGAGCAGGCG
TTCCTCCACC CGCTGCCGGT CGAGCGGCTC TGGGGGGTCG GTGCGGTCAC GGCGGCCAAG
CTGCACGCGG AAGGCATCCG CAGCATCGGC GAGCTCGCGG CCCGCGAGGA GGTCGAGCTG
ACCGCGACCG TCGGCCGGGC CGCCGGCCGG CACCTGTGGG CGCTGGCGAA CCTGCTCGAC
CCGCGCCCGG TCGAGGTGGG CCGGCGGCGC CGCTCGATCG GCTCGCAGTG CGCGATCGGC
CGGCCCGGGA GACCGAAGAG CCGCGGCGAC CTGGAGGCGC TGCTGGCCGG TCTGGTCGAC
CGGGTGGCCC GCCGGCTGCG GGCGGGGGAA CGGATCGGCC AGACGTTCAC GCTCCGGCTC
CGGTTCGACG ACTTCAGCCG AGCGACCCGC TCCGCGACGC TGGCACACTC GACCGCGACC
ACCGCGACCT GGCTGGAGAC CGGGCGGCGA CTGCTCGCCG CCAGCTGGCC GCTCATCGAG
GAGCGCGGCT GCACCCTCCT CGGTGTCACG ATCTCCGGGC TGGTCGACGG CCGGTCCCAG
CAGCTCGAGC TGCCGCTGTT CCCCGACACC GTGCACGAGC ACGGCCTCGA CGCCGCGCTC
GACCGGGTCC GCGACCGGTT CGGCTCGGCG TCGGTGACCC GGGCGGTCCT GGTCGGTCGG
CGCACCGGCC TCGAGATGCC CACGCTCCCC GACCCCGGGC CGCCGACGCC GGTACCGTGA
 
Protein sequence
MFDTGLVGRI ASRAEASILH ADLDSFFASV EQRDDPRLRG RPVIVGGGVV LAASYEAKAF 
GVRSAMGGRE AARRCPDALV VPPRFSAYVE ASKQVFAIFE DTTPLVEGIS IDEAFLDVGG
LRRLVGPPEQ IGRGLRARVK DEVGLPISVG IARTKYLAKV ASAVSKPDGL LAVSPDGEQA
FLHPLPVERL WGVGAVTAAK LHAEGIRSIG ELAAREEVEL TATVGRAAGR HLWALANLLD
PRPVEVGRRR RSIGSQCAIG RPGRPKSRGD LEALLAGLVD RVARRLRAGE RIGQTFTLRL
RFDDFSRATR SATLAHSTAT TATWLETGRR LLAASWPLIE ERGCTLLGVT ISGLVDGRSQ
QLELPLFPDT VHEHGLDAAL DRVRDRFGSA SVTRAVLVGR RTGLEMPTLP DPGPPTPVP