Gene Noca_4517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4517 
Symbol 
ID4597036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp4776831 
End bp4777421 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content76% 
IMG OID639779128 
Productprotein tyrosine phosphatase 
Protein accessionYP_925701 
Protein GI119718736 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.113878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGGGC GCGAGCTGCC GCCGGCCCGG ACCCCCGGTC GGTACCACGT CGCCGTGGTG 
TGCCTGGGCA ACATCTGCCG CTCGCCGATG GCGCAGGTCG TGCTCACCGA GCGGGTCGCC 
GACGCCGGCC TCGCCGACCG GGTCACGGTC AGCAGCGCCG GCACCGGCGA CTGGCACGTC 
GGCGACCCGA TGGACCGCCG CGCCGCCGCG ACGCTGACCC GGTCGGGGTA CGACGCCACC 
CGGCACCGGG CCCGCCAGTG GACCGGCCGC GACCCCGTCG ACCTGGTGCT CGCCATGGAC 
GCGCAGAACC ACGCCGACAT CACCGACCTC GAGGACCCGG CCGAGGACCT GGCGGAGGAC 
CTGGCGGAGG ATCCGGCGGA GGACCCGGCC CCGGCCGAGA GGGCGGGCCG GGTGCGGCTG 
TTCCGCGAGT TCGACCCGGT CGAACCGGGC AGCGACGTGC CCGACCCGTA CTACGGTGGG 
GACTCCGGAT TCGAGGAGGT GCTCGCGATG GTGGAGCGCA CGGCCGAGGC GCTGGTGCAG 
ACCCTGGAGC GCGAGCGACC CTGGAGCGGC GGGGGTGAGC GGGTCTCGTG A
 
Protein sequence
MAGRELPPAR TPGRYHVAVV CLGNICRSPM AQVVLTERVA DAGLADRVTV SSAGTGDWHV 
GDPMDRRAAA TLTRSGYDAT RHRARQWTGR DPVDLVLAMD AQNHADITDL EDPAEDLAED 
LAEDPAEDPA PAERAGRVRL FREFDPVEPG SDVPDPYYGG DSGFEEVLAM VERTAEALVQ 
TLERERPWSG GGERVS