| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4492 |
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| Symbol | |
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| ID | 4597011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 4749317 |
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| End bp | 4750780 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639779103 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_925676 |
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| Protein GI | 119718711 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.44231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACC TGAAGAGCCG CTGGCTCGCG CTGTACGTGC TGTGCCTGGG CGACCTGATG
ATCGTGCTGG ACTCCAGCAT CGTGAACGTC GCGCTGCCGT CGATCCAGGC CGACCTGGGG
TTCACCCGGT CGGCGCTGGC CTGGGTGGTC AATGCGTACC TGCTGACCTT CGGCGGCTTC
CTGCTGCTCT CCGGGCGCCT GGGCGACCTG CTGGGCAACA AGCGGGTCTT CCTCGGCGGC
GTGGTGTCCT TCACCGTCGC GTCGGTCGCG TGCGGCCTCG CGCCGTCCTC CGGGCTGCTC
GTCGTGGGCC GCGCCGTGCA GGGCCTGGGC GGCGCCGCGG TCTCCGCGGT CGCGCTCTCG
CTGATCATGG GGCTGTTCTC CGACCCGGCC GAGCGGGCCC GGGCGATGGG CTTCTTCGGC
TTCGTGATGT CCGGGGGCGG CGCCGTCGGG GTGCTGCTCG GCGGCGTCCT GACCGGGCTG
TTCTCGTGGC ACTGGATCTT CCTGGTGAAC GTGCCCATCG GCGTCGGGGT CTGGCTGGCC
GCGCGCCGGG TGCTGCCCGC CGACGAGGTC GTGCCGGGCG CGGGGCGACT CGATGTCCCC
GGGGCGGTGC TGGTGACCGC CGCGCTGATG CTGAGCGTGT ACGGGATCGT CGGCGGCAAC
GAGGCGGGGT GGACCTCCGG GCGCACGCTC GGTCTGCTCG GCGCCAGCGC GGTGCTGCTC
GCGGCGTTCG TGCTCCGCGA GGCGCGCGCC GCCAGCCCGC TGGTCCCGCT GCGCCTGTTC
GCGCTGCGCA ACGTCTCCGT GTCGCAGGTG GTGGGGATGC TGTGGGCGGC CGCGATGTTC
GCGTGGTTCT TCCTGGCCGC GCTCTACCTT CAGCAGGTGC TGGGGTACGA CGCCCTCGAG
GTCGGCCTCG CGTTCGTCCC GACCAGCGTG GTGATGGCGT TCTGCTCGCT GCGGGTCTCC
GACCGGCTGG TCATGCGCTT CGGCATCCGC CGGCCGCTGA TGGCCGGGCT CGCGCTCGCC
GCCGCCAGCC TGGCGCTGTT CTCGCGGGCC CCGGTGGACG GCAGCTTCGG GACCGACGTA
CTGCCCTCGA TGCTGCTGCT CGGCGCCGGC GCGGGCATCG CGTTCAACCC GGTGCTGCTC
GCCGCGATGG GCGACGTCGA GCCGCACGAG TCCGGCCTCG CCTCCGGCGT CGTCAACACC
TCGTTCATGA TGGGCGGCGC GCTCGGCCTG GCGGTGCTGG TCAGCCTCTC CACCTGGCGC
ACCGAGTCGC TCGCCGCCGA CGGAGCCGAC CGCCTCGAGG CCCTCAACGG CGGCTTCCAG
TTCGCCTTCG CCACCGGCGC GCTCGCCGCC CTCGCGGCGG CCGTCATCGG CGGCCTGCTC
CTCCGCCCCA AGCCGATGGG CGGCGCGGAG CTCGACGCGG TCGCGATCGC CGACGAGCCC
ACCCTCGACG CGAGCCTCGG ATAG
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| Protein sequence | MTDLKSRWLA LYVLCLGDLM IVLDSSIVNV ALPSIQADLG FTRSALAWVV NAYLLTFGGF
LLLSGRLGDL LGNKRVFLGG VVSFTVASVA CGLAPSSGLL VVGRAVQGLG GAAVSAVALS
LIMGLFSDPA ERARAMGFFG FVMSGGGAVG VLLGGVLTGL FSWHWIFLVN VPIGVGVWLA
ARRVLPADEV VPGAGRLDVP GAVLVTAALM LSVYGIVGGN EAGWTSGRTL GLLGASAVLL
AAFVLREARA ASPLVPLRLF ALRNVSVSQV VGMLWAAAMF AWFFLAALYL QQVLGYDALE
VGLAFVPTSV VMAFCSLRVS DRLVMRFGIR RPLMAGLALA AASLALFSRA PVDGSFGTDV
LPSMLLLGAG AGIAFNPVLL AAMGDVEPHE SGLASGVVNT SFMMGGALGL AVLVSLSTWR
TESLAADGAD RLEALNGGFQ FAFATGALAA LAAAVIGGLL LRPKPMGGAE LDAVAIADEP
TLDASLG
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